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Sample GSM926307 Query DataSets for GSM926307
Status Public on May 06, 2012
Title Low_948
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.3654673998726 5624.7 1330.63071240671 0 48
ILMN_2721178 10.4775057592933 1364.1 305.452878261116 0 38
ILMN_3033922 10.9400200329051 1968.4 410.598149045998 0 44
ILMN_3092673 12.5242472965726 6336.4 1830.08928799335 0 43
ILMN_2816356 9.01950865956372 372.8 119.161332923059 0.09273 34
ILMN_2808939 10.8134336407537 1781.5 543.036963290714 0 35
ILMN_2634564 9.99981015313479 924.4 275.518606268252 0 24
ILMN_2737647 8.92442695084397 336.4 130.796560275873 0.47368 45
ILMN_2734484 10.9978153553874 2074.7 575.460934124985 0 44
ILMN_2952292 9.21670438986558 452.9 147.056 0.00251 49
ILMN_2699078 9.00775663329852 368.3 119.692873668402 0.12657 47
ILMN_1213681 9.72208003298051 726.5 234.174934943943 0 39
ILMN_2735413 8.880032649072 320.1 84.7241785737696 0.68546 35
ILMN_2735415 8.88940655037739 323.4 100.594427758201 0.64787 39
ILMN_2891688 10.8163455569367 1785.1 558.627954660345 0 27
ILMN_2637698 11.3024591714616 2606.5 622.904776992439 0 47
ILMN_2674228 9.8820812202964 833.8 246.781406268787 0 45
ILMN_2601546 9.00964821352608 369 158.165644815807 0.12406 32
ILMN_1230831 9.01346764528359 370.4 125.17 0.11529 25
ILMN_2848071 8.96700858247453 352.9 96.1979491673289 0.25689 39

Total number of rows: 25697

Table truncated, full table size 1520 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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