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Sample GSM926308 Query DataSets for GSM926308
Status Public on May 06, 2012
Title Low_949
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.4977751484882 4617.4 967.466084596251 0 44
ILMN_2721178 10.6588396089238 1215.4 312.757717730514 0 44
ILMN_3033922 11.0261895287337 1585.8 411.677 0 49
ILMN_3092673 12.6160052793469 5098.6 1109.59059606686 0 45
ILMN_2816356 8.91944005310914 303.1 85.2148479080964 0.51128 29
ILMN_2808939 10.6685245781492 1223.4 305.545592080789 0 40
ILMN_2634564 10.2371478241786 888.9 311.181965524996 0 37
ILMN_2737647 8.88468154437909 292.1 88.722686563246 0.66667 39
ILMN_2734484 11.2580289150267 1876.7 622.002050011091 0 42
ILMN_2952292 9.06296223865039 346.7 103.033632989427 0.03885 47
ILMN_2699078 8.90067193224782 297.1 75.084 0.599 36
ILMN_1213681 9.91749301181793 694.8 234.48549450659 0 46
ILMN_2735413 8.88171131421168 291.1 104.386361393623 0.68296 45
ILMN_2735415 8.89069028476522 294 131.476303324972 0.64662 34
ILMN_2891688 10.7841360518057 1330.3 463.496796105432 0 27
ILMN_2637698 11.2346695634676 1840.5 483.954532989412 0 41
ILMN_2674228 9.82428596374196 649 175.730177260481 0 50
ILMN_2601546 8.8609863938292 284.3 76.5661503799166 0.76817 24
ILMN_1230831 9.15447188911164 375.3 140.443759985982 0.00251 39
ILMN_2848071 8.95671693703871 315 89.803071216969 0.30201 39

Total number of rows: 25697

Table truncated, full table size 1516 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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