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Sample GSM926311 Query DataSets for GSM926311
Status Public on May 06, 2012
Title Low_960
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.3563703494026 12287.5 2577.72127591794 0 45
ILMN_2721178 10.6011339263968 3087.2 791.406946373988 0 41
ILMN_3033922 10.9657325779544 4261.8 1149.78758257167 0 44
ILMN_3092673 12.789830909431 16846 3396.738 0 36
ILMN_2816356 9.11835629784096 538.2 180.810109299784 0.00376 33
ILMN_2808939 10.7063679441324 3395.2 799.292950270425 0 48
ILMN_2634564 10.1196053699677 1985.4 752.314536216734 0 27
ILMN_2737647 9.0727560240332 494.8 207.493602792954 0.01003 33
ILMN_2734484 11.0517016867194 4567.2 1596.38437709218 0 44
ILMN_2952292 9.14718874566689 565.5 136.706487940405 0.00125 45
ILMN_2699078 8.97518949237787 416 143.954206718665 0.16792 48
ILMN_1213681 9.82419281257525 1443.8 336.552778422642 0 46
ILMN_2735413 8.94430530757228 397.8 146.795257559636 0.30702 42
ILMN_2735415 8.90729857407032 379.1 137.527455440723 0.49749 40
ILMN_2891688 10.7820295486034 3633 1327.18896030671 0 40
ILMN_2637698 11.2598794646034 5362.5 1436.48329454992 0 41
ILMN_2674228 9.9909392945283 1727.9 554.191160941782 0 34
ILMN_2601546 8.99653751464295 430 110.695768821577 0.10401 35
ILMN_1230831 9.06614312685314 488.7 166.089684303391 0.01378 28
ILMN_2848071 9.10883182576153 528.9 201.761984922829 0.00376 35

Total number of rows: 25697

Table truncated, full table size 1518 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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