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Sample GSM926417 Query DataSets for GSM926417
Status Public on May 06, 2012
Title HSCC_High_752
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.9058037542709 8969 1966.226148043 0 38
ILMN_2721178 10.79915895584 1938.7 533.932874402766 0 43
ILMN_3033922 11.2561365754482 2782.2 752.400496278412 0 43
ILMN_3092673 13.0418979383101 9843.5 2312.85493080392 0 44
ILMN_2816356 9.21121305422901 409.1 96.675 0.17544 25
ILMN_2808939 10.8673091593538 2038.7 624.302062364045 0 28
ILMN_2634564 10.4856288702781 1491.4 429.497779501827 0 37
ILMN_2737647 9.23066363350792 418.7 142.631475081764 0.12406 29
ILMN_2734484 11.4144253857964 3140.3 652.040283148212 0 42
ILMN_2952292 9.2450324331495 426.7 132.796235646949 0.09148 58
ILMN_2699078 9.12137070212065 361.9 112.152 0.61278 36
ILMN_1213681 10.0295155846929 1000.4 345.093802900023 0 48
ILMN_2735413 9.16240000864423 384.5 180.836407039622 0.37469 39
ILMN_2735415 9.11454809650866 358.4 122.631419301906 0.64912 26
ILMN_2891688 11.433217408249 3196 704.387640628369 0 30
ILMN_2637698 10.7463410246382 1856.9 432.342077063984 0 51
ILMN_2674228 9.94423310506224 915.7 291.25272258985 0 44
ILMN_2601546 9.18277500671325 394.9 162.894640028455 0.27318 38
ILMN_1230831 9.2437778454015 426.1 130.69806817241 0.09273 26
ILMN_2848071 9.17153069591746 389.3 108.577812259227 0.32957 35

Total number of rows: 25697

Table truncated, full table size 1525 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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