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Sample GSM926429 Query DataSets for GSM926429
Status Public on May 06, 2012
Title HSCC_High_725
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.9958496687723 8189.8 1583.21198726134 0 52
ILMN_2721178 10.9425207196061 1823.5 420.805632685685 0 45
ILMN_3033922 11.098544922105 2074.2 640.373026080893 0 53
ILMN_3092673 12.8078514441158 7217.4 1503.37630425386 0 42
ILMN_2816356 9.27065762796424 396.6 156.685985892166 0.0401 47
ILMN_2808939 11.0933873995522 2062.9 661.94543944724 0 45
ILMN_2634564 10.4859881479154 1257.6 406.614632899506 0 42
ILMN_2737647 9.18167690683923 357.7 152.3 0.23559 25
ILMN_2734484 11.4384295288091 2668.4 897.295 0 49
ILMN_2952292 9.38606691247354 452.7 138.484222928101 0.00376 47
ILMN_2699078 9.28375196059331 402.6 130.037297372715 0.03008 37
ILMN_1213681 10.0356179241069 858.4 297.726774180624 0 44
ILMN_2735413 9.16901087114135 352.1 82.9316063994904 0.31328 35
ILMN_2735415 9.21960287527911 373.4 104.671749770413 0.11278 38
ILMN_2891688 11.3677546935726 2517.1 580.872221447196 0 41
ILMN_2637698 10.8781113253604 1734.9 507.175853808124 0 46
ILMN_2674228 9.99793904567901 832.3 202.678091487462 0 41
ILMN_2601546 9.17828440676242 356.2 113.730889471594 0.25313 45
ILMN_1230831 9.24322624816674 383.9 156.267894975264 0.07519 38
ILMN_2848071 9.32341317673375 421.5 154.481130025644 0.01128 46

Total number of rows: 25697

Table truncated, full table size 1544 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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