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Sample GSM926430 Query DataSets for GSM926430
Status Public on May 06, 2012
Title HSCC_High_704
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.9958496687723 10240.5 2439.54336454591 0 44
ILMN_2721178 10.8905165549321 2137.7 597.528 0 36
ILMN_3033922 11.4192418581407 3299.6 763.070248509271 0 40
ILMN_3092673 13.3780145162064 13551.6 2954.14195551805 0 42
ILMN_2816356 9.23321748194124 412.9 143.202302551321 0.09649 29
ILMN_2808939 10.9616158242508 2276.2 470.914403050066 0 24
ILMN_2634564 10.4634160183045 1491.8 560.539265350787 0 30
ILMN_2737647 9.21327770647784 402.6 120.607092764066 0.16165 33
ILMN_2734484 11.7173299867236 4107 1037.48005474804 0 40
ILMN_2952292 9.33202578622295 469.6 146.815554652768 0.00877 48
ILMN_2699078 9.13806037923161 364.5 117.625948897342 0.51003 46
ILMN_1213681 9.76976145278878 772.8 197.597871759794 0.00125 44
ILMN_2735413 9.20680379283715 399.2 127.170223401549 0.18045 30
ILMN_2735415 9.19364649678649 392.5 118.845014316967 0.23058 37
ILMN_2891688 11.3739422881119 3187.5 736.682713792037 0 33
ILMN_2637698 10.7810633166906 1953.1 390.440098145669 0 40
ILMN_2674228 9.94815988299567 924.4 296.103481615803 0.00125 33
ILMN_2601546 9.18726420777381 389.4 123.143873067238 0.25689 34
ILMN_1230831 9.36080830432972 486.9 213.63 0.00627 25
ILMN_2848071 9.19598494780196 393.8 115.674 0.22306 36

Total number of rows: 25697

Table truncated, full table size 1543 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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