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Sample GSM926438 Query DataSets for GSM926438
Status Public on May 06, 2012
Title HSCC_High_740
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.887706168007 11595.9 2757.07918632092 0 39
ILMN_2721178 10.6917182319624 2298 667.408399659459 0 46
ILMN_3033922 11.1793869218727 3450.2 970.876792541155 0 55
ILMN_3092673 13.2005192642699 14465.9 3801.16166667915 0 39
ILMN_2816356 9.25664559195614 469.1 130.154555882612 0.05639 33
ILMN_2808939 10.9000119888235 2727.9 1022.1425433588 0 34
ILMN_2634564 10.4258099454539 1809.9 807.769041278508 0 28
ILMN_2737647 9.21385097772431 437.9 160.542512251428 0.13534 40
ILMN_2734484 11.2040420832232 3516.7 1095.65779763985 0 41
ILMN_2952292 9.31364908880554 511.4 163.845792436059 0.0188 51
ILMN_2699078 9.22787379897215 447.9 166.620471011218 0.099 35
ILMN_1213681 9.89569771190674 1072.4 400.976181861217 0 45
ILMN_2735413 9.19334163073322 423.5 167.492592982496 0.20927 26
ILMN_2735415 9.3102443992151 508.4 175.260861783229 0.0188 33
ILMN_2891688 11.0962887433484 3226.9 891.667431837678 0 40
ILMN_2637698 11.5879765700466 4660.3 1267.70272078867 0 55
ILMN_2674228 9.95306885480489 1134.7 413.835174841385 0 44
ILMN_2601546 9.24707653321209 461.8 153.596484334766 0.06767 52
ILMN_1230831 9.21958342389294 441.8 112.259228128471 0.12155 28
ILMN_2848071 9.3413049829222 530.6 196.794172047853 0.01253 42

Total number of rows: 25697

Table truncated, full table size 1529 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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