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Sample GSM926442 Query DataSets for GSM926442
Status Public on May 06, 2012
Title HSCC_High_662
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.620235879766 8308.4 2006.07485895068 0 34
ILMN_2721178 10.6835225157018 2087.9 611.535178628343 0 27
ILMN_3033922 10.6405495388142 2012.5 510.334693353293 0 40
ILMN_3092673 12.5233368364074 7869.7 1927.54445017437 0 38
ILMN_2816356 9.27000141441513 562.9 183.972213901991 0.06266 32
ILMN_2808939 10.8732683097276 2408.6 585.139651457667 0 28
ILMN_2634564 10.3817927584887 1646.9 432.856830316908 0 32
ILMN_2737647 9.25232913593771 550.6 196.929766881495 0.08521 39
ILMN_2734484 11.4448372381711 3662 985.716586871703 0 34
ILMN_2952292 9.18243708706937 501.3 145.754457616225 0.28697 35
ILMN_2699078 9.13590831573925 468.4 176.709091809109 0.5188 38
ILMN_1213681 9.66373604831752 867.2 236.768324927554 0.00125 41
ILMN_2735413 9.07081850950026 425.8 200.524718144672 0.82707 27
ILMN_2735415 9.21708053278072 526.2 168.875860888997 0.14536 31
ILMN_2891688 10.7178463144965 2145.4 501.777829314927 0 42
ILMN_2637698 11.2590448499927 3225.6 740.712600642112 0 30
ILMN_2674228 9.91416323066851 1094.9 361.057336651674 0.00125 46
ILMN_2601546 9.19882124047098 512.5 181.848460372916 0.2193 35
ILMN_1230831 9.29852771118875 582.8 229.535 0.03759 25
ILMN_2848071 9.31793911615761 597.5 221.115439081037 0.02882 24

Total number of rows: 25697

Table truncated, full table size 1543 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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