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Sample GSM926456 Query DataSets for GSM926456
Status Public on May 06, 2012
Title HSCC_High_685
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.861151225275 9325.7 2540.41664779933 0 46
ILMN_2721178 10.738564583597 1874.9 643.183803300425 0 47
ILMN_3033922 10.9038558074543 2176.9 733.210485173255 0 52
ILMN_3092673 12.4960944050624 7265.6 1746.45633236992 0 35
ILMN_2816356 9.36979728987521 456.9 125.587041911178 0.00125 34
ILMN_2808939 11.0444622698815 2413.6 748.920254893003 0 29
ILMN_2634564 10.1581410558759 1108 311.881445038014 0 39
ILMN_2737647 9.22465887824942 370.3 147.405 0.09524 25
ILMN_2734484 11.4628335062159 3377.7 1309.5597564678 0 35
ILMN_2952292 9.23977469349231 378.2 122.907969737524 0.06767 41
ILMN_2699078 9.32420420723218 427.6 145.671067992241 0.01003 50
ILMN_1213681 9.83875698469538 804.2 289.777494032922 0 53
ILMN_2735413 9.22014648825901 367.8 171.189004053999 0.1015 29
ILMN_2735415 9.04270710335224 292.6 103.152552115786 0.91228 28
ILMN_2891688 11.5405273550002 3623.2 1542.47336664722 0 34
ILMN_2637698 10.6745161693725 1780.7 590.551036290683 0 46
ILMN_2674228 10.0040158080998 956.4 463.890160374199 0 28
ILMN_2601546 9.18722259896978 351.3 125.671 0.20802 49
ILMN_1230831 9.21264535488664 363.7 119.651051395297 0.11905 21
ILMN_2848071 9.28288259241763 402.8 159.085860547064 0.03258 34

Total number of rows: 25697

Table truncated, full table size 1518 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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