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Sample GSM926465 Query DataSets for GSM926465
Status Public on May 06, 2012
Title HSCC_Low_681
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.8629817622418 5053.5 1229.54822727699 0 48
ILMN_2721178 10.7578775026142 1093.5 353.295115373819 0 43
ILMN_3033922 11.0847051175965 1382.8 347.396 0 49
ILMN_3092673 13.1228895538436 5999.3 1405.84115674282 0 42
ILMN_2816356 9.38931065804337 352.2 123.301240480378 0.00501 39
ILMN_2808939 10.9437738225522 1249 414.419837054164 0 31
ILMN_2634564 10.4100324297884 837 325.740663586848 0 26
ILMN_2737647 9.27725505865548 321.3 98.7895541036602 0.05138 40
ILMN_2734484 11.290508329912 1627.7 517.995708669483 0 38
ILMN_2952292 9.4665970389356 375.9 88.9776169606716 0.00125 45
ILMN_2699078 9.34220093264566 338.8 108.672316861287 0.01504 57
ILMN_1213681 10.0053673689975 601.7 193.471309617214 0 45
ILMN_2735413 9.19826510955807 298.9 105.803594929473 0.21303 28
ILMN_2735415 9.11377752799936 272.7 68.0938562280034 0.66165 34
ILMN_2891688 11.17420777884 1492 458.49077850814 0 33
ILMN_2637698 11.6563696581597 2112.2 619.45028779798 0 37
ILMN_2674228 10.108864071245 650.5 190.225861543587 0 56
ILMN_2601546 9.179268396086 293.1 89.142 0.28822 36
ILMN_1230831 9.20975759531037 302.2 90.7935334646692 0.17794 31
ILMN_2848071 9.06161873924367 256.4 72.507869724603 0.87469 33

Total number of rows: 25697

Table truncated, full table size 1522 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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