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Sample GSM926477 Query DataSets for GSM926477
Status Public on May 06, 2012
Title HSCC_Low_734
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.7687082498182 8478.3 2139.8167818117 0 43
ILMN_2721178 10.7709085204579 1893.8 495.160993061853 0 42
ILMN_3033922 11.0595584697116 2384.5 512.059377984624 0 38
ILMN_3092673 12.7949537969961 8632.9 2176.52894456288 0 30
ILMN_2816356 9.28802423890128 389 146.373376267681 0.02757 30
ILMN_2808939 10.9134000871919 2122.1 545.119747615146 0 40
ILMN_2634564 10.3783756578411 1349.4 597.866808137063 0 17
ILMN_2737647 9.22274949877173 350.1 99.0709616789905 0.11028 22
ILMN_2734484 11.4210138775041 3190.2 887.069619315756 0 33
ILMN_2952292 9.2869581109862 388.2 131.885149918404 0.03133 41
ILMN_2699078 9.13159884808109 303.4 99.9658392852278 0.53258 34
ILMN_1213681 9.92512792203165 868.2 337.607008902363 0 35
ILMN_2735413 9.17034741715738 322.3 128.06956876245 0.29574 27
ILMN_2735415 9.17615281331222 325.2 97.725 0.26817 25
ILMN_2891688 11.0976759532908 2459.4 780.272455153967 0 33
ILMN_2637698 11.2724368093993 2818.7 630.152350190016 0 50
ILMN_2674228 10.0880709036217 1018.8 374.234589085509 0 52
ILMN_2601546 9.14763307382175 311.2 103.41860938922 0.42607 32
ILMN_1230831 9.30977767461072 401.7 118.513784227827 0.02256 28
ILMN_2848071 9.32253601675577 409.4 169.280460384535 0.01754 28

Total number of rows: 25697

Table truncated, full table size 1521 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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