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Sample GSM926486 Query DataSets for GSM926486
Status Public on May 06, 2012
Title HSCC_Low_696
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.9877919213036 7537.1 1508.3696339462 0 59
ILMN_2721178 10.7642312187483 1484 393.504264876507 0 44
ILMN_3033922 10.8930592860873 1637.8 366.792935417246 0 48
ILMN_3092673 12.677071139334 6061.4 1326.2114667341 0 57
ILMN_2816356 9.35973815904127 437.4 154.188876278414 0.00376 32
ILMN_2808939 10.8717048116623 1610.9 376.95 0 36
ILMN_2634564 10.364697604929 1076.5 358.095530871303 0 30
ILMN_2737647 9.08168477516887 317.4 104.108745607658 0.77444 32
ILMN_2734484 11.428709930085 2470 767.028065360062 0 42
ILMN_2952292 9.35773138681254 436.4 120.419533299212 0.00501 40
ILMN_2699078 9.34459281017692 430.3 110.197768126219 0.00501 41
ILMN_1213681 10.0820880568191 857.8 212.82 0 36
ILMN_2735413 9.18590879993207 360 145.184438959552 0.24436 41
ILMN_2735415 9.18730578287999 360.6 136.927666579841 0.2406 35
ILMN_2891688 11.2566622556744 2196.2 495.080942503345 0 30
ILMN_2637698 11.5360551252017 2661.4 772.184481529511 0 35
ILMN_2674228 9.97973145125808 785.8 268.562622805185 0 58
ILMN_2601546 9.0939933427598 322.3 89.0786620409175 0.71679 31
ILMN_1230831 9.14299064674891 342.8 107.430302429063 0.44486 30
ILMN_2848071 9.2561594263587 390.4 130.014613328656 0.05514 39

Total number of rows: 25697

Table truncated, full table size 1525 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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