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Sample GSM93003 Query DataSets for GSM93003
Status Public on Feb 15, 2006
Title Muscle-AMPKgamma3-wt-4
Sample type RNA
 
Source name White portion of the gastrocnemius muscle
Organism Mus musculus
Characteristics Strain: C57BL/6
Genotype: wild type
Generation: F7
Gender: male
Tissue: white portion of the gastrocnemius muscle
Feeding condition: fasted
Extracted molecule total RNA
Label Biotin
 
Description Expression profiles generated from the white portion of the gastrocnemicus muscle from wild type littermates to AMPK gamma3 knock-out mice
Data processing Quantile normalization and RMA (using GeneTraffic Uno version 3.2-11)
 
Submission date Jan 18, 2006
Last update date Feb 15, 2006
Contact name Elisabeth C Nilsson
E-mail(s) elisabeth.c.nilsson@gmail.com
Organization name Arexis AB
Street address Arvid Wallgrens Backe 20
City Göteborg
ZIP/Postal code 43146
Country Sweden
 
Platform ID GPL339
Series (2)
GSE4063 Gene expression in skeletal muscle in AMPK gamma3 knock-out mice and wild type littermates
GSE4067 AMPK gamma3 knock-out and mutant (R225Q) transgenic mice compared to corresponding wild type littermates

Data table header descriptions
ID_REF
VALUE RMA intensity
ABS_CALL Affymetrix detection call
DETECTION P-VALUE Affymetrix detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
1415770_at 142.9127384 A 0.171387
1415771_at 1334.033954 P 0.000244
1415772_at 63.00450606 P 0.008057
1415773_at 218.0059212 P 0.000244
1415774_at 116.9021369 A 0.850342
1415775_at 1231.335688 P 0.000244
1415776_at 95.09562215 P 0.037598
1415777_at 53.99612857 A 0.780518
1415778_at 1616.214285 P 0.000244
1415779_s_at 1367.133309 P 0.000244
1415780_a_at 65.38143882 A 0.27417
1415781_a_at 2765.226968 P 0.000244
1415782_at 1670.559987 P 0.000244
1415783_at 964.678144 P 0.000244
1415784_at 96.97840217 P 0.00293
1415785_a_at 583.7840753 P 0.000244
1415786_at 124.7090181 A 0.696289
1415787_at 142.6666762 A 0.129639
1415788_at 311.0053402 P 0.000244
1415789_a_at 106.2391968 P 0.001953

Total number of rows: 22690

Table truncated, full table size 760 Kbytes.




Supplementary file Size Download File type/resource
GSM93003.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM93003.EXP.gz 501 b (ftp)(http) EXP

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