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Sample GSM93236 Query DataSets for GSM93236
Status Public on Feb 15, 2006
Title Muscle-AMPKgamma3-wt-8
Sample type RNA
 
Source name White portion of the gastrocnemius muscle
Organism Mus musculus
Characteristics Strain: C57BL/6
Genotype: wild type
Generation: F5
Gender: male
Tissue: white portion of the gastrocnemius muscle
Feeding condition: fasted
Extracted molecule total RNA
Label Biotin
 
Description Expression profiles generated from the white portion of the gastrocnemicus muscle from wild type littermates to AMPK gamma3 mutant (R225Q) transgenic mice
Data processing Quantile normalization and RMA (using GeneTraffic Uno version 3.2-11)
 
Submission date Jan 19, 2006
Last update date Feb 15, 2006
Contact name Elisabeth C Nilsson
E-mail(s) elisabeth.c.nilsson@gmail.com
Organization name Arexis AB
Street address Arvid Wallgrens Backe 20
City Göteborg
ZIP/Postal code 43146
Country Sweden
 
Platform ID GPL339
Series (2)
GSE4065 Gene expression in skeletal muscle in AMPK gamma3 mutant (R225Q) transgenic mice and wild type littermates.
GSE4067 AMPK gamma3 knock-out and mutant (R225Q) transgenic mice compared to corresponding wild type littermates

Data table header descriptions
ID_REF
VALUE RMA intensity
ABS_CALL Affymetrix detection call
DETECTION P-VALUE Affymetrix detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
1415770_at 95.27187725 A 0.095215
1415771_at 1043.003797 P 0.000244
1415772_at 41.9758465 A 0.080566
1415773_at 188.696743 P 0.000244
1415774_at 86.52535117 A 0.969727
1415775_at 1004.45624 P 0.000244
1415776_at 58.4250578 P 0.046143
1415777_at 30.45791102 A 0.780518
1415778_at 1277.850052 P 0.000244
1415779_s_at 947.7446116 P 0.000244
1415780_a_at 38.09446903 A 0.111572
1415781_a_at 2734.06407 P 0.000244
1415782_at 1582.779191 P 0.000244
1415783_at 763.4739366 P 0.000244
1415784_at 48.14951881 P 0.023926
1415785_a_at 373.7277018 P 0.000244
1415786_at 151.8478691 A 0.72583
1415787_at 101.8368591 A 0.19458
1415788_at 250.3569941 P 0.000244
1415789_a_at 86.07294266 P 0.010742

Total number of rows: 22690

Table truncated, full table size 760 Kbytes.




Supplementary file Size Download File type/resource
GSM93236.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM93236.EXP.gz 499 b (ftp)(http) EXP
Raw data provided as supplementary file

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