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Sample GSM93239 Query DataSets for GSM93239
Status Public on Feb 15, 2006
Title Muscle-AMPKgamma3-wt-11
Sample type RNA
Source name White portion of the gastrocnemius muscle
Organism Mus musculus
Characteristics Strain: C57BL/6
Genotype: wild type
Generation: F5
Gender: male
Tissue: white portion of the gastrocnemius muscle
Feeding condition: fasted
Extracted molecule total RNA
Label Biotin
Description Expression profiles generated from the white portion of the gastrocnemicus muscle from wild type littermates to AMPK gamma3 mutant (R225Q) transgenic mice
Data processing Quantile normalization and RMA (using GeneTraffic Uno version 3.2-11)
Submission date Jan 19, 2006
Last update date Feb 15, 2006
Contact name Elisabeth C Nilsson
Organization name Arexis AB
Street address Arvid Wallgrens Backe 20
City Göteborg
ZIP/Postal code 43146
Country Sweden
Platform ID GPL339
Series (2)
GSE4065 Gene expression in skeletal muscle in AMPK gamma3 mutant (R225Q) transgenic mice and wild type littermates.
GSE4067 AMPK gamma3 knock-out and mutant (R225Q) transgenic mice compared to corresponding wild type littermates

Data table header descriptions
VALUE RMA intensity
ABS_CALL Affymetrix detection call
DETECTION P-VALUE Affymetrix detection p-value

Data table
1415770_at 112.6993552 A 0.219482
1415771_at 1178.142024 P 0.000244
1415772_at 45.12041943 P 0.030273
1415773_at 192.3593098 P 0.000244
1415774_at 97.38002086 A 0.850342
1415775_at 1048.771166 P 0.000244
1415776_at 75.73116369 P 0.037598
1415777_at 29.61500559 A 0.943848
1415778_at 1320.04594 P 0.000244
1415779_s_at 845.5261988 P 0.000244
1415780_a_at 34.33340704 A 0.27417
1415781_a_at 2629.006254 P 0.000244
1415782_at 1542.993035 P 0.000244
1415783_at 839.1700461 P 0.000244
1415784_at 52.25283563 P 0.018555
1415785_a_at 368.8737908 P 0.000244
1415786_at 177.9918569 A 0.567627
1415787_at 113.8527813 P 0.037598
1415788_at 227.9950567 P 0.000244
1415789_a_at 78.0934508 P 0.001221

Total number of rows: 22690

Table truncated, full table size 760 Kbytes.

Supplementary file Size Download File type/resource
GSM93239.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM93239.EXP.gz 502 b (ftp)(http) EXP
Raw data provided as supplementary file

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