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Sample GSM942922 Query DataSets for GSM942922
Status Public on May 28, 2015
Title IPS-MEP_1
Sample type RNA
 
Source name differentiated inducible pluripotent stem cells derived from mammary epithelial cells
Organism Mus musculus
Characteristics cell type: differentiated inducible pluripotent stem cells derived from mammary epithelial cells
Extracted molecule total RNA
Extraction protocol Total RNA was extracted by RNA STAT-60TM solution according to manufacturer's instruction (Tel-Test, INC).
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description 07-28-11_C_Deng_YL#4_Mo_Gene1_0_ST_IPS-MEP_1
Data processing RMA by software Partek
 
Submission date Jun 04, 2012
Last update date May 28, 2015
Contact name WeiPing Chen
E-mail(s) weipingChen@niddk.nih.gov
Phone 301-496-0175
Organization name NIDDK/NIH
Department GCL
Lab Genomics Core Lab
Street address Bldg 8, Room 1A11, NIDDK/NIH
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL10740
Series (1)
GSE38471 Enhancing Mammary Differentiation by Overcoming Lineage Specific Epigenetic Modification and Signature Gene Expression of Fibroblast Derived iPSCs

Data table header descriptions
ID_REF
VALUE RMA normalized

Data table
ID_REF VALUE
10338001 12.4113
10338002 6.63062
10338003 11.0308
10338004 10.384
10338005 3.15804
10338006 3.40848
10338007 3.8644
10338008 4.53399
10338009 7.29145
10338010 3.19408
10338011 6.19777
10338012 3.31669
10338013 2.99538
10338014 3.09112
10338015 3.0196
10338016 7.23104
10338017 13.7002
10338018 6.9122
10338019 5.78263
10338020 7.64855

Total number of rows: 241576

Table truncated, full table size 3984 Kbytes.




Supplementary file Size Download File type/resource
GSM942922_07-28-11_C_Deng_YL_4_Mo_Gene1_0_ST_IPS-MEP_1.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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