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Sample GSM942926 Query DataSets for GSM942926
Status Public on May 28, 2015
Title IPS-TIP-2
Sample type RNA
 
Source name differentiated inducible pluripotent stem cells derived from tail tip fibroblasts
Organism Mus musculus
Characteristics cell type: differentiated inducible pluripotent stem cells derived from tail tip fibroblasts
Extracted molecule total RNA
Extraction protocol Total RNA was extracted by RNA STAT-60TM solution according to manufacturer's instruction (Tel-Test, INC).
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description 07-28-11_C_Deng_YL#8_Mo_Gene1_0_ST_IPS-TIP-2
Data processing RMA by software Partek
 
Submission date Jun 04, 2012
Last update date May 28, 2015
Contact name WeiPing Chen
E-mail(s) weipingChen@niddk.nih.gov
Phone 301-496-0175
Organization name NIDDK/NIH
Department GCL
Lab Genomics Core Lab
Street address Bldg 8, Room 1A11, NIDDK/NIH
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL10740
Series (1)
GSE38471 Enhancing Mammary Differentiation by Overcoming Lineage Specific Epigenetic Modification and Signature Gene Expression of Fibroblast Derived iPSCs

Data table header descriptions
ID_REF
VALUE RMA normalized

Data table
ID_REF VALUE
10338001 12.3415
10338002 6.52419
10338003 10.9465
10338004 10.1666
10338005 3.10515
10338006 3.34505
10338007 3.82457
10338008 4.50616
10338009 7.27508
10338010 3.16682
10338011 6.19777
10338012 3.29217
10338013 2.96846
10338014 3.05612
10338015 3.01649
10338016 7.18213
10338017 13.6846
10338018 6.85229
10338019 5.76616
10338020 7.64855

Total number of rows: 241576

Table truncated, full table size 3984 Kbytes.




Supplementary file Size Download File type/resource
GSM942926_07-28-11_C_Deng_YL_8_Mo_Gene1_0_ST_IPS-TIP-2.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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