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GEO accession:
Sample GSM94355
Query DataSets for GSM94355
Status
Public on Jul 01, 2006
Title
PBMCs from an HIV positive non-transmitter mother in Botswana (4)
Sample type
RNA
Source name
Human peripheral blood mononuclear cells (PBMCs) from an HIV positive Batswana woman
Organism
Homo sapiens
Characteristics
Botswana mother between 17 and 44 years old. HIV positive. Did not transmit virus to child.
Extracted molecule
total RNA
Label
Biotin
Description
HIV seropositive and drug naive
HIV seropositive nontransmitter mothers
Data processing
Data scaled with GCOS
Submission date
Jan 30, 2006
Last update date
Sep 13, 2006
Contact name
Monty Montano
E-mail(s)
mmontano@bu.edu
Phone
617 414-4806
Fax
617 414-3561
URL
http://www.bmc.org/HIV-AIDS/MontyMontano.htm
Organization name
Boston Medical Center
Department
Medicine
Lab
Center for HIV-1/AIDS Care and Research
Street address
650 Albany Street, Bldg X, room 640
City
Boston
State/province
MA
ZIP/Postal code
02118
Country
USA
Platform ID
GPL571
Series (1)
GSE4124
Gene-expression profiling of HIV-1 infection and perinatal transmission in Botswana
Data table header descriptions
ID_REF
VALUE
GCOS scaled intensity values
DETECTION_P-VALUE
Quality of measurement
ABS_CALL
Present, absent or marginal call
SCALED_VALUE
Scaled intensity values
Data table
ID_REF
VALUE
DETECTION_P-VALUE
ABS_CALL
SCALED_VALUE
1007_s_at
31.1
0.060419
M
159.3909108
1053_at
22.1
0.031336
P
113.2649238
117_at
188.6
0.000219
P
966.5956843
121_at
51.4
0.014937
P
263.4306372
1255_g_at
5.3
0.32083
A
27.16308127
1294_at
236.8
0.000562
P
1213.625971
1316_at
3.7
0.175989
A
18.96290579
1320_at
0.8
0.918698
A
4.100087738
1405_i_at
3217.5
0.000491
P
16490.04037
1431_at
7.9
0.02786
P
40.48836642
1438_at
1.8
0.781017
A
9.225197411
1487_at
58
0.021866
P
297.256361
1494_f_at
12.9
0.107301
A
66.11391478
1598_g_at
53.1
0.024711
P
272.1433236
160020_at
33.9
0.006532
P
173.7412179
1729_at
150
0.000562
P
768.766451
177_at
5.6
0.35869
A
28.70061417
1773_at
5.3
0.5
A
27.16308127
179_at
62.4
0.127645
A
319.8068436
1861_at
25.8
0.039365
P
132.2278296
Total number of rows:
22277
Table truncated, full table size
833 Kbytes
.
Supplementary data files not provided
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