 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on May 15, 2006 |
| Title |
Rat Limbus Epithelium |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
41894 |
| Tag Length |
10 |
| |
|
| Source name |
6-week male Wister rats
|
| Organism |
Rattus norvegicus |
| Characteristics |
48 eyes, 6-week male Wister rats were used.
|
| Extracted molecule |
total RNA |
| Extraction protocol |
SNAP total RNA isolation kit (Invitrogen, Carlsbad, CA)
|
| |
|
| Description |
Limbal Epithelial region, from the termination of Bowman's layer to approximately 1 mm peripherally on the conjunctival side, was scraped.
|
| Data processing |
SAGE2000
|
| |
|
| Submission date |
Jan 30, 2006 |
| Last update date |
Nov 19, 2008 |
| Contact name |
Hagit Ulanovsky |
| E-mail(s) |
hu8z@nih.gov
|
| Phone |
301-402-4987
|
| Organization name |
NEI
|
| Lab |
LMDB
|
| Street address |
7 Memorial Dr, room 135
|
| City |
Bethedsa |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
| |
|
| Platform ID |
GPL23 |
| Series (1) |
| GSE4121 |
Limbal and Central Corneal Epithelia |
|
| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| Data table |
| TAG |
COUNT |
TPM |
| AAAAAAAAAA |
0 |
0.00 |
| AAAAAAAAAG |
0 |
0.00 |
| AAAAACAAGT |
0 |
0.00 |
| AAAAACACCT |
2 |
47.74 |
| AAAAATCATC |
9 |
214.83 |
| AAAAATGGAT |
0 |
0.00 |
| AAAACAGTGG |
24 |
572.87 |
| AAAACATTCT |
0 |
0.00 |
| AAAACCAGCT |
0 |
0.00 |
| AAAACTCCAC |
0 |
0.00 |
| AAAACTGAAG |
0 |
0.00 |
| AAAACTGCAA |
7 |
167.09 |
| AAAACTGGCA |
0 |
0.00 |
| AAAACTGTCT |
0 |
0.00 |
| AAAAGATACT |
0 |
0.00 |
| AAAAGGCTTT |
0 |
0.00 |
| AAAATAAAAA |
0 |
0.00 |
| AAAATCAAGT |
1 |
23.87 |
| AAAATCACAG |
2 |
47.74 |
| AAAATGCTGA |
1 |
23.87 |
Total number of rows: 8551
Table truncated, full table size 157 Kbytes.
| Supplementary data files not provided |
|
|
|
|
 |
