|
| Status |
Public on Jun 30, 2013 |
| Title |
female_BMM_ARK_loaded_2 |
| Sample type |
RNA |
| |
|
| Source name |
bone marrow derived macrophage, 100mg acetylated low density lipoprotein loaded
|
| Organism |
Mus musculus |
| Characteristics |
gender: female
strain: AKR
cell type: bone marrow derived macrophage
agent: AcLDL
dose: 100ug/ml
|
| Extracted molecule |
total RNA |
| Extraction protocol |
standard as recommended by illumina
|
| Label |
Cy3
|
| Label protocol |
standard as recommended by illumina
|
| |
|
| Hybridization protocol |
standard as recommended by illumina
|
| Scan protocol |
standard as recommended by illumina
|
| Description |
Bone marrow derived macrophages were loaded with 50-100 ug/ml AcLDL and washed twice with PBS for collection of RNA.
|
| Data processing |
The data was preprocessed by Bioconductor lumi package (version 2.6.0). It was log2 transformed and quantile normalized.
|
| |
|
| Submission date |
Jun 14, 2012 |
| Last update date |
Jun 30, 2013 |
| Contact name |
Jeff Hsu |
| E-mail(s) |
hsuj@ccf.org
|
| Phone |
2162443723
|
| Organization name |
Cleveland Clinic Lerner Research Institute
|
| Department |
Cellular and Molecular Medicine
|
| Lab |
Smith
|
| Street address |
9500 Euclid Ave
|
| City |
Cleveland |
| State/province |
OH |
| ZIP/Postal code |
44195 |
| Country |
USA |
| |
|
| Platform ID |
GPL6103 |
| Series (1) |
| GSE38736 |
Characterization of cholesterol loading effect on the gene expression of bone marrow derived macrophages of AKR and DBA/2 ApoE-deficient mice |
|
