GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM95948
Query DataSets for GSM95948
Status
Public on Feb 09, 2006
Title
Pachytene spermatocytes replicate 1
Sample type
RNA
Source name
Pachytene spermatocytes
Organism
Mus musculus
Characteristics
Strain: BL/6-129
Extracted molecule
total RNA
Label
Biotin-dUTP
Description
Mouse 430 2.0
Data processing
Affymetrix Microarray Suite version 5.0
Submission date
Feb 06, 2006
Last update date
Aug 28, 2018
Contact name
Lizhong Yang
E-mail(s)
lzyang@wsu.edu
Phone
1-509-335-2240
Fax
1-509-335-9688
URL
http://www.wsu.edu/~griswold
Organization name
Washington State University
Department
School of Molecular Biosciences
Lab
Griswold Lab/Center for Reproductive Biology
Street address
531 Fulmer Hall/POB 644660
City
Pullman
State/province
WA
ZIP/Postal code
99164-4660
Country
USA
Platform ID
GPL1261
Series (1)
GSE4193
Gene expression in murine germ cells
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
MAS5-calculated Signal intensity
ABS_CALL
The call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
P-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
101.2
P
0.00141
AFFX-BioB-M_at
113.6
P
0.00006
AFFX-BioB-3_at
68
P
0.000195
AFFX-BioC-5_at
203.6
P
0.000081
AFFX-BioC-3_at
222.4
P
0.000044
AFFX-BioDn-5_at
477.9
P
0.000052
AFFX-BioDn-3_at
987.1
P
0.000297
AFFX-CreX-5_at
2620.5
P
0.000052
AFFX-CreX-3_at
2978.5
P
0.000044
AFFX-DapX-5_at
11.9
A
0.216524
AFFX-DapX-M_at
8.2
A
0.216524
AFFX-DapX-3_at
2.4
A
0.804754
AFFX-LysX-5_at
6.5
A
0.382599
AFFX-LysX-M_at
1.7
A
0.824672
AFFX-LysX-3_at
8.8
A
0.089478
AFFX-PheX-5_at
0.7
A
0.949771
AFFX-PheX-M_at
1
A
0.834139
AFFX-PheX-3_at
3.5
A
0.760937
AFFX-ThrX-5_at
0.8
A
0.966323
AFFX-ThrX-M_at
3.1
A
0.617401
Total number of rows:
45101
Table truncated, full table size
1193 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM95948.CEL.gz
6.7 Mb
(ftp)
(http)
CEL
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
