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Sample GSM96636 Query DataSets for GSM96636
Status Public on Aug 08, 2006
Title wt 62hrs DD
Sample type RNA
 
Source name adult mouse whole adrenal 62hrs after lights off
Organism Mus musculus
Characteristics Strain: C57B/6J Gender: male Age: 3 months Tissue: whole adrenal
Treatment protocol 2 weeks entrainment to LD 12:12
Extracted molecule total RNA
Extraction protocol RNeasy Micro Kit (QIAGEN)
Label biotin
Label protocol http://www.rzpd.de/protocols
 
Hybridization protocol http://www.rzpd.de/protocols
Scan protocol http://www.rzpd.de/protocols
Description sample is part of a series (of 12 time points) to identify circadian clock regulated genes in the murine adrenal
Data processing expression data were normalized and modelled (PM/MM model) using Dchip 1.3
 
Submission date Feb 14, 2006
Last update date May 21, 2007
Contact name Henrik Oster
E-mail(s) henrik.oster@uni-luebeck.de
Organization name University of Lübeck
Department CBBM
Street address Marie Curie Street
City Lübeck
ZIP/Postal code 23562
Country Germany
 
Platform ID GPL1261
Series (2)
GSE4238 rhythmic transcriptome in the murine wt adrenal
GSE4253 Wildtype and Per2Cry1 double mutant mice: temporal gene expression profiling of adrenal gland

Data table header descriptions
ID_REF
VALUE normalized expression value
CALL expression call; P- present, M - marginally expressed, A - absent

Data table
ID_REF VALUE CALL
AFFX-BioB-5_at 223.592 P
AFFX-BioB-M_at 219.918 P
AFFX-BioB-3_at 288.448 P
AFFX-BioC-5_at 301.499 P
AFFX-BioC-3_at 354.763 P
AFFX-BioDn-5_at 1184.14 P
AFFX-BioDn-3_at 2511.99 P
AFFX-CreX-5_at 5161.16 P
AFFX-CreX-3_at 5380.44 P
AFFX-DapX-5_at 86.6857 A
AFFX-DapX-M_at 120.72 A
AFFX-DapX-3_at 25.9093 A
AFFX-LysX-5_at 98.8629 P
AFFX-LysX-M_at 246.709 A
AFFX-LysX-3_at 65.3106 P
AFFX-PheX-5_at 99.0814 A
AFFX-PheX-M_at 326.842 A
AFFX-PheX-3_at 200.994 A
AFFX-ThrX-5_at 105.954 A
AFFX-ThrX-M_at 410.072 A

Total number of rows: 45101

Table truncated, full table size 937 Kbytes.




Supplementary data files not provided

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