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Sample GSM96930 Query DataSets for GSM96930
Status Public on Aug 08, 2006
Title wt 66hrs DD B
Sample type RNA
 
Source name adult mouse whole adrenal 66hrs after lights off
Organism Mus musculus
Characteristics Strain: C57B/6J
Gender: male
Age: 3 months
Tissue: whole adrenal
Treatment protocol 2 weeks entrainment to LD 12:12
Extracted molecule total RNA
Extraction protocol RNeasy Micro Kit (QIAGEN)
Label biotin
Label protocol http://www.rzpd.de/protocols
 
Hybridization protocol http://www.rzpd.de/protocols
Scan protocol http://www.rzpd.de/protocols
Description sample is part of a series (of 12 time points) to identify circadian clock regulated genes in the murine adrenal
Data processing expression data were normalized and modelled (PM/MM model) using Dchip 1.3
 
Submission date Feb 16, 2006
Last update date May 24, 2007
Contact name Henrik Oster
E-mail(s) henrik.oster@uni-luebeck.de
Organization name University of Lübeck
Department CBBM
Street address Marie Curie Street
City Lübeck
ZIP/Postal code 23562
Country Germany
 
Platform ID GPL1261
Series (2)
GSE4238 rhythmic transcriptome in the murine wt adrenal
GSE4253 Wildtype and Per2Cry1 double mutant mice: temporal gene expression profiling of adrenal gland

Data table header descriptions
ID_REF
VALUE normalized expression value
CALL expression call; A - absent, M - marginally expressed, P - present

Data table
ID_REF VALUE CALL
AFFX-BioB-5_at 208.33 P
AFFX-BioB-M_at 225.626 P
AFFX-BioB-3_at 286.241 P
AFFX-BioC-5_at 335.376 P
AFFX-BioC-3_at 390.712 P
AFFX-BioDn-5_at 1409.54 P
AFFX-BioDn-3_at 2557.14 P
AFFX-CreX-5_at 5466.35 P
AFFX-CreX-3_at 5941.4 P
AFFX-DapX-5_at 85.7647 A
AFFX-DapX-M_at 81.0053 A
AFFX-DapX-3_at 26.3634 A
AFFX-LysX-5_at 105.081 A
AFFX-LysX-M_at 202.522 A
AFFX-LysX-3_at 41.4108 A
AFFX-PheX-5_at 98.9266 A
AFFX-PheX-M_at 365.62 A
AFFX-PheX-3_at 210.068 A
AFFX-ThrX-5_at 96.9136 A
AFFX-ThrX-M_at 366.042 A

Total number of rows: 45101

Table truncated, full table size 937 Kbytes.




Supplementary data files not provided

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