NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM96945 Query DataSets for GSM96945
Status Public on Dec 31, 2006
Title control day 5 (#9) vs. 400 mg/kg day 5 BECM (#54)
Sample type RNA
 
Channel 1
Source name control day 5 (#9)
Organism Rattus norvegicus
Characteristics Total cardiac RNA from control day 5 (#9)
Extracted molecule total RNA
Extraction protocol QIAGEN Rneasy kit (QIAGEN, Valencia, CA)
Label Cy3
 
Channel 2
Source name 400 mg/kg day 5 BECM (#54)
Organism Rattus norvegicus
Characteristics Total cardiac RNA from 400 mg/kg day 5 BECM (#54)
Extracted molecule total RNA
Extraction protocol QIAGEN Rneasy kit (QIAGEN, Valencia, CA)
Label Cy5
 
 
Description control day 5 (#9) vs. 400 mg/kg day 5 BECM (#54)
Data processing Loess normalized, and combined dye flip replicates with Rosetta Resolver error weighted model
 
Submission date Feb 16, 2006
Last update date Feb 17, 2006
Contact name Joel Parker
E-mail(s) jparker@constellagroup.com
Organization name Constella Group
Street address 2605 Meridian Parkway
City Durham
State/province NC
ZIP/Postal code 27713
Country USA
 
Platform ID GPL890
Series (1)
GSE4254 Bis(2-chloroethoxy)methane-induced heart toxicity and recovery in male fisher rats

Data table header descriptions
ID_REF probeset IDs from the Agilent Rat Oligo (4130A) array
VALUE log2 of PRE_VALUE
PRE_VALUE ratios: Loess normalized, and combined dye flip replicates with Rosetta Resolver

Data table
ID_REF VALUE PRE_VALUE
3 -0.0685 0.95361
4 0.1143 1.08248
5 -0.2138 0.86225
6 -0.2359 0.84913
8 -0.2943 0.81546
9 -1.4672 0.36169
10 -0.4773 0.71832
11 -0.7739 0.58484
12 -0.2117 0.86351
13 0.0669 1.04749
15 -0.1029 0.93119
16 -0.0578 0.96074
17 -0.1981 0.87171
18 0.0435 1.03058
19 0.2310 1.17365
20 -0.9260 0.52632
22 0.2769 1.21155
23 -0.3540 0.78242
24 -0.5707 0.67331
25 -0.2245 0.85592

Total number of rows: 20500

Table truncated, full table size 418 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap