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Sample GSM9714

Query DataSets for GSM9714

Status

Public on Aug 06, 2004

Title

nl030

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:40, Count:32
Corner- Avg:4233, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:38.272709,SFGene:All
Background:Avg:37.79,Stdev:0.92,Max:39.8,Min:35.4
Noise:Avg:1.27,Stdev:0.05,Max:1.4,Min:1.1
RawQ:1.74
Keywords = ALL
Lot batch =

Submission date

Sep 05, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

william.evans@stjude.org

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (4)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643	ASP sensitive all ALL
GSE653	ASP sensitive B-ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	839.2	0.002228
1053_at	653.7	0.007543
117_at	34.7	0.520620
121_at	1068.2	0.001354
1255_g_at	37.0	0.541184
1294_at	958.6	0.000805
1316_at	341.8	0.013092
1320_at	32.0	0.781017
1405_i_at	371.6	0.015164
1431_at	59.1	0.679170
1438_at	196.0	0.378184
1487_at	173.3	0.438361
1494_f_at	236.7	0.054470
1598_g_at	981.7	0.204022
160020_at	588.5	0.073830
1729_at	223.3	0.054470
1773_at	263.0	0.048995
177_at	166.8	0.520620
179_at	784.5	0.021866
1861_at	201.3	0.048995

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9714.CEL.gz	2.9 Mb	(ftp)(http)	CEL