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Sample GSM97311 Query DataSets for GSM97311
Status Public on Dec 31, 2006
Title 5-hydroxymethyl-2-furfural_18month_rat_413_liver
Sample type RNA
 
Channel 1
Source name 5-hydroxymethyl-2-furfural_18month_rat_413_liver - all samples are UNTREATED - chemical names are for study association only
Organism Rattus norvegicus
Characteristics 5-hydroxymethyl-2-furfural_18month_rat_413_liver - all samples are UNTREATED - chemical names are for study association only
Extracted molecule total RNA
Extraction protocol Paradigm Array Labs (Icoria, Inc., A Clinical Data Inc. Company, RTP, NC)
Label Cy5
 
Channel 2
Source name Equal amounts of RNA from sixty-three male sentinel rats (25 rats at 32 weeks of age, 25 rats at 58 weeks of age and 13 rats at 84 weeks of age) were used to form a composite control pool
Organism Rattus norvegicus
Characteristics Equal amounts of RNA from sixty-three male sentinel rats (25 rats at 32 weeks of age, 25 rats at 58 weeks of age and 13 rats at 84 weeks of age) were used to form a composite control pool
Extracted molecule total RNA
Extraction protocol Paradigm Array Labs (Icoria, Inc., A Clinical Data Inc. Company, RTP, NC)
Label Cy3
 
 
Description 5-hydroxymethyl-2-furfural_18month_rat_413_liver
Data processing Loess normalized with Rosetta Resolver error weighted model
 
Submission date Feb 17, 2006
Last update date Feb 17, 2006
Contact name Joel Parker
E-mail(s) jparker@constellagroup.com
Organization name Constella Group
Street address 2605 Meridian Parkway
City Durham
State/province NC
ZIP/Postal code 27713
Country USA
 
Platform ID GPL890
Series (1)
GSE4270 Aging Induced Alterations in Hepatic Gene Expression of the Male Fisher Rat

Data table header descriptions
ID_REF probeset IDs from the Agilent Rat Oligo (4130A) array
VALUE log ratios: Loess normalized with Rosetta Resolver

Data table
ID_REF VALUE
3 0.328
4 -0.394
5 -0.447
6 0.118
8 -0.715
9 0.77
10 -0.258
11 -0.494
12 -1.553
13 -0.255
15 0.468
16 0.767
17 -0.439
18 1.316
19 0.502
20 0.073
22 -0.26
23 0.462
24 -0.2
25 1.201

Total number of rows: 20277

Table truncated, full table size 235 Kbytes.




Supplementary data files not provided

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