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Sample GSM97624 Query DataSets for GSM97624
Status Public on Apr 29, 2009
Title cochlear stim PBMC from AIED patient #1
Sample type RNA
 
Source name cochlear stim PBMC from AIED patient
Organism Homo sapiens
Characteristics comparison of PBMC from AIED and control patients
Biomaterial provider A. Vambutas
Treatment protocol autologous cochlear perilymph fluid stimulated PBMC of AIED patient 1
Extracted molecule total RNA
Extraction protocol affinity spin column
Label biotin
Label protocol Enzo protocol
 
Hybridization protocol Affymetrix protocol to HG-U133A 2.0
Scan protocol Genesifter
Description AIED patient 1 stim PBMC with autologous perilymph
Data processing Affymetrix
 
Submission date Feb 20, 2006
Last update date Apr 24, 2009
Contact name Andrea Vambutas
E-mail(s) vambutas@lij.edu
Phone 718-470-7955
Fax 718-470-4281
Organization name Long Island Jewish Medical Center
Department Otolaryngology
Street address 430 Lakeville Road
City New Hyde Park
State/province NY
ZIP/Postal code 11042
Country USA
 
Platform ID GPL571
Series (1)
GSE4277 IL1R2 and glucocorticoid responsiveness in patients with AIED

Data table header descriptions
ID_REF
VALUE VALUE OF COCHLEAR FLUID STIMULATED PBMC FROM PATIENT WITH AIED
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2358 P 0.000581
AFFX-BioB-M_at 3521.2 P 0.000044
AFFX-BioB-3_at 2416.9 P 0.00007
AFFX-BioC-5_at 7219.5 P 0.000052
AFFX-BioC-3_at 10752.1 P 0.000044
AFFX-BioDn-5_at 17127.5 P 0.000044
AFFX-BioDn-3_at 43320.1 P 0.000052
AFFX-CreX-5_at 88399.7 P 0.000052
AFFX-CreX-3_at 109946.8 P 0.000044
AFFX-DapX-5_at 27.2 A 0.5
AFFX-DapX-M_at 273.9 A 0.205732
AFFX-DapX-3_at 11.8 A 0.998407
AFFX-LysX-5_at 22.6 A 0.737191
AFFX-LysX-M_at 26.5 A 0.953533
AFFX-LysX-3_at 24.1 A 0.724871
AFFX-PheX-5_at 30.6 A 0.645547
AFFX-PheX-M_at 97 A 0.659352
AFFX-PheX-3_at 343.3 A 0.313723
AFFX-ThrX-5_at 87.8 A 0.724854
AFFX-ThrX-M_at 48.4 A 0.659339

Total number of rows: 22277

Table truncated, full table size 603 Kbytes.




Supplementary data files not provided

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