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Sample GSM97626 Query DataSets for GSM97626
Status Public on Apr 29, 2009
Title unstimulated PBMC from AIED patient #1
Sample type RNA
 
Source name unstimulated PBMC from AIED patient
Organism Homo sapiens
Characteristics PBMC from AIED patient #1 as baseline for stimulation with either pneumococcal antigen or cochlear perilymph fluid
Biomaterial provider A. Vambutas
Treatment protocol 16 hour culture without stimulation
Extracted molecule total RNA
Extraction protocol affinity spin column
Label biotin
Label protocol Enzo protocol
 
Hybridization protocol Affymetrix protocol to HG-U133A 2.0
Description AIED patient 1 PBMC
Data processing Affymetrix
 
Submission date Feb 20, 2006
Last update date Apr 24, 2009
Contact name Andrea Vambutas
E-mail(s) vambutas@lij.edu
Phone 718-470-7955
Fax 718-470-4281
Organization name Long Island Jewish Medical Center
Department Otolaryngology
Street address 430 Lakeville Road
City New Hyde Park
State/province NY
ZIP/Postal code 11042
Country USA
 
Platform ID GPL571
Series (1)
GSE4277 IL1R2 and glucocorticoid responsiveness in patients with AIED

Data table header descriptions
ID_REF
VALUE ABSOLUTE VALUE OF UNSTIMULATED PBMC FROM AIED PATIENT #1
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 3360.8 P 0.000297
AFFX-BioB-M_at 4677.5 P 0.000044
AFFX-BioB-3_at 3116.1 P 0.00007
AFFX-BioC-5_at 10666.4 P 0.000052
AFFX-BioC-3_at 13204.7 P 0.000044
AFFX-BioDn-5_at 22515 P 0.000044
AFFX-BioDn-3_at 53401.6 P 0.000052
AFFX-CreX-5_at 110807 P 0.000052
AFFX-CreX-3_at 132034.1 P 0.000044
AFFX-DapX-5_at 89.6 A 0.39692
AFFX-DapX-M_at 279 A 0.287743
AFFX-DapX-3_at 28.8 A 0.937071
AFFX-LysX-5_at 31.1 A 0.783476
AFFX-LysX-M_at 36 A 0.814869
AFFX-LysX-3_at 108.7 A 0.239063
AFFX-PheX-5_at 26.9 A 0.852061
AFFX-PheX-M_at 28.5 A 0.749204
AFFX-PheX-3_at 124.2 A 0.544587
AFFX-ThrX-5_at 28.5 A 0.957038
AFFX-ThrX-M_at 16.8 A 0.86866

Total number of rows: 22277

Table truncated, full table size 603 Kbytes.




Supplementary data files not provided

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