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Sample GSM97630 Query DataSets for GSM97630
Status Public on Apr 29, 2009
Title unstimulated PBMC from AIED patient #2
Sample type RNA
 
Source name unstimulated PBMC from AIED patient
Organism Homo sapiens
Characteristics PBMC from AIED patient#2, for comparison to stimulated conditions
Biomaterial provider A. Vambutas
Treatment protocol 16 hour culture without stimulation
Extracted molecule total RNA
Extraction protocol affinity spin column
Label biotin
Label protocol Enzo protocol
 
Hybridization protocol Affymetrix protocol to HG-U133A 2.0
Description AIED patient 2 PBMC stimulated with pneumococcal antigen
Data processing Affymetrix
 
Submission date Feb 20, 2006
Last update date Apr 24, 2009
Contact name Andrea Vambutas
E-mail(s) vambutas@lij.edu
Phone 718-470-7955
Fax 718-470-4281
Organization name Long Island Jewish Medical Center
Department Otolaryngology
Street address 430 Lakeville Road
City New Hyde Park
State/province NY
ZIP/Postal code 11042
Country USA
 
Platform ID GPL571
Series (1)
GSE4277 IL1R2 and glucocorticoid responsiveness in patients with AIED

Data table header descriptions
ID_REF
VALUE VALUE OF UNSTIMULATED PBMC FROM AIED PATIENT #2
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 3289.8 P 0.000509
AFFX-BioB-M_at 4552.5 P 0.000052
AFFX-BioB-3_at 2735.1 P 0.000052
AFFX-BioC-5_at 9253 P 0.000052
AFFX-BioC-3_at 12901.3 P 0.000044
AFFX-BioDn-5_at 20958.9 P 0.000044
AFFX-BioDn-3_at 59296.7 P 0.000052
AFFX-CreX-5_at 109392.7 P 0.000052
AFFX-CreX-3_at 132440.4 P 0.000044
AFFX-DapX-5_at 30.5 A 0.58862
AFFX-DapX-M_at 240.4 A 0.455413
AFFX-DapX-3_at 69 A 0.772364
AFFX-LysX-5_at 92.4 A 0.58862
AFFX-LysX-M_at 146.6 A 0.617401
AFFX-LysX-3_at 124.9 A 0.313723
AFFX-PheX-5_at 21.9 A 0.9273
AFFX-PheX-M_at 40.2 A 0.804734
AFFX-PheX-3_at 90.4 A 0.41138
AFFX-ThrX-5_at 100.8 A 0.772364
AFFX-ThrX-M_at 12 A 0.941556

Total number of rows: 22277

Table truncated, full table size 602 Kbytes.




Supplementary data files not provided

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