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Sample GSM97633 Query DataSets for GSM97633
Status Public on Apr 29, 2009
Title PBMC stimulated with pneumococcal antigen, AIED patient #3
Sample type RNA
 
Source name PBMC stimulated with pneumococcal antigen, AIED patient
Organism Homo sapiens
Characteristics PBMC from AIED patient #3 stimulated with pneumococcal antigen
Biomaterial provider A. Vambutas
Treatment protocol 16 hour culture with 100ul pneumococcal antigen stimulation
Extracted molecule total RNA
Extraction protocol affinity spin column
Label biotin
Label protocol Enzo protocol
 
Hybridization protocol Affymetrix protocol to HG-U133A 2.0
Description AIED patient 3 PBMC stimulated with pneumococcal antigen
Data processing Affymetrix
 
Submission date Feb 20, 2006
Last update date Apr 24, 2009
Contact name Andrea Vambutas
E-mail(s) vambutas@lij.edu
Phone 718-470-7955
Fax 718-470-4281
Organization name Long Island Jewish Medical Center
Department Otolaryngology
Street address 430 Lakeville Road
City New Hyde Park
State/province NY
ZIP/Postal code 11042
Country USA
 
Platform ID GPL571
Series (1)
GSE4277 IL1R2 and glucocorticoid responsiveness in patients with AIED

Data table header descriptions
ID_REF
VALUE VALUE OF PNEUMOCOCCAL STIMULATED PBMC FROM AIED PATIENT #3
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 4099.6 P 0.000297
AFFX-BioB-M_at 5713.9 P 0.000044
AFFX-BioB-3_at 3048.4 P 0.000052
AFFX-BioC-5_at 10245.3 P 0.000044
AFFX-BioC-3_at 14297.3 P 0.000044
AFFX-BioDn-5_at 21921.5 P 0.000044
AFFX-BioDn-3_at 59009.6 P 0.000052
AFFX-CreX-5_at 149694.2 P 0.000052
AFFX-CreX-3_at 187532.6 P 0.000044
AFFX-DapX-5_at 111.3 A 0.440646
AFFX-DapX-M_at 49.5 A 0.724871
AFFX-DapX-3_at 48.9 A 0.852061
AFFX-LysX-5_at 9.1 A 0.995002
AFFX-LysX-M_at 93.4 A 0.876428
AFFX-LysX-3_at 82.2 A 0.382599
AFFX-PheX-5_at 107.7 A 0.672921
AFFX-PheX-M_at 64.8 A 0.712274
AFFX-PheX-3_at 485 A 0.340661
AFFX-ThrX-5_at 26.6 A 0.976081
AFFX-ThrX-M_at 93.5 A 0.772364

Total number of rows: 22277

Table truncated, full table size 602 Kbytes.




Supplementary data files not provided

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