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Status
Public on Aug 06, 2004
Title
nl085
Sample type
RNA
Source name
primary acute lymphoblastic leukemia cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: Human Total RNA Project: Evans Sample User: jmorris Experiment User: jmorris Algorithm: Statistical Corner+ Avg:53, Count:32 Corner- Avg:4190, Count:32 BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:53.121811,SFGene:All Background:Avg:32.28,Stdev:1.03,Max:34.7,Min:30.2 Noise:Avg:1.12,Stdev:0.04,Max:1.2,Min:1.0 RawQ:1.58 Keywords = ALL Lot batch =
Submission date
Sep 06, 2003
Last update date
May 28, 2005
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL96
Series (10)
GSE635
Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE645
ASP resistant all ALL
GSE646
PRED sensitive all ALL
GSE648
VCR sensitive all ALL
GSE650
DNR sensitive all ALL
GSE654
ASP resistant B-ALL
GSE655
PRED sensitive B-ALL
GSE657
VCR sensitive B-ALL
GSE659
DNR sensitive B-ALL
GSE2351
chemotherapy cross-resistance and treatment response in childhood acute lymphoblastic leukemia
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE
Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.
Data table
ID_REF
VALUE
DETECTION P-VALUE
1007_s_at
816.1
0.002228
1053_at
462.2
0.019304
117_at
315.2
0.081337
121_at
1462.8
0.019304
1255_g_at
47.6
0.749276
1294_at
1083.4
0.002617
1316_at
236.1
0.011447
1320_at
34.7
0.849473
1405_i_at
110.5
0.364945
1431_at
299.4
0.021866
1438_at
63.0
0.541184
1487_at
470.7
0.162935
1494_f_at
309.3
0.073830
1598_g_at
1405.1
0.117160
160020_at
844.8
0.048995
1729_at
64.6
0.901946
1773_at
471.1
0.035163
177_at
186.4
0.218983
179_at
1002.0
0.150527
1861_at
223.7
0.378184
Total number of rows: 22283 Table truncated, full table size 561 Kbytes .Supplementary file
Size
Download
File type/resource
GSM9769.CEL.gz
2.9 Mb
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CEL