NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM978305 Query DataSets for GSM978305
Status Public on Jul 17, 2013
Title wild-type muscle_AB2
Sample type RNA
 
Source name wild-type muscle
Organism Danio rerio
Characteristics strain: AB
transgene: wild type
tissue type: muscle
Growth protocol Transgenic F0 animals grown until tumor visible, tumor or muscle dissected from adult
Extracted molecule total RNA
Extraction protocol Trizol RNA prep
Label biotin
Label protocol Affymetrix zebrafish array protocol
 
Hybridization protocol Affymetrix zebrafish array protocol
Scan protocol Affymetrix zebrafish array protocol
Data processing Affymetrix Gene Console, followed by GenePattern analysis
 
Submission date Jul 30, 2012
Last update date Jul 17, 2013
Contact name Richard Mark White
E-mail(s) whiter@mskcc.org
Phone 646-888-3415
Organization name Memorial Sloan Kettering Cancer Center
Department Cancer Biology & Genetics
Lab White Lab
Street address 1275 York Avenue MB 424
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platform ID GPL1319
Series (1)
GSE39731 Expression arrays of KRASG12D rhabdomyosarcoma models in zebrafish

Data table header descriptions
ID_REF
VALUE GC-RMA signal

Data table
ID_REF VALUE
AFFX-BioB-3_at 209.2427891
AFFX-BioB-5_at 209.3194051
AFFX-BioB-M_at 251.815042
AFFX-BioC-3_at 507.309257
AFFX-BioC-5_at 602.8515062
AFFX-BioDn-3_at 2946.398668
AFFX-BioDn-5_at 905.4201508
AFFX-CreX-3_at 7202.123348
AFFX-CreX-5_at 4530.599708
AFFX-DapX-3_at 942.0226995
AFFX-DapX-5_at 144.3389268
AFFX-DapX-M_at 451.6061856
AFFX-Dr-AB076373-1_at 13.32937048
AFFX-Dr-acta1-3_at 25465.29136
AFFX-Dr-acta1-5_at 618.4245236
AFFX-Dr-acta1-5_x_at 6238.03266
AFFX-Dr-acta1-M_at 13619.69154
AFFX-Dr-AF292559-1_at 7.853587684
AFFX-Dr-AF292559-2_s_at 5.449247942
AFFX-Dr-AF292559-3_s_at 6.720143056

Total number of rows: 15617

Table truncated, full table size 436 Kbytes.




Supplementary file Size Download File type/resource
GSM978305_ABR5.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap