GEO help: Mouse over screen elements for information.
Status
Public on Aug 06, 2004
Title
nl109
Sample type
RNA
Source name
primary acute lymphoblastic leukemia cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: Human Total RNA Project: Evans Sample User: jmorris Experiment User: jmorris Algorithm: Statistical Corner+ Avg:63, Count:32 Corner- Avg:5631, Count:32 BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:32.654297,SFGene:All Background:Avg:43.44,Stdev:1.26,Max:46.6,Min:40.3 Noise:Avg:1.54,Stdev:0.07,Max:1.7,Min:1.4 RawQ:1.96 Keywords = ALL
Submission date
Sep 06, 2003
Last update date
May 28, 2005
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL96
Series (4)
GSE635
Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE647
PRED resistant all ALL
GSE649
VCR resistant all ALL
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.
Data table
ID_REF
VALUE
Detection_p_value
1007_s_at
352.7
0.438361
1053_at
422.4
0.035163
117_at
51.3
0.715253
121_at
1529.6
0.004180
1255_g_at
81.1
0.541184
1294_at
761.9
0.043968
1316_at
269.4
0.009985
1320_at
86.6
0.621816
1405_i_at
337.6
0.027766
1431_at
128.6
0.234557
1438_at
32.1
0.837065
1487_at
627.8
0.418069
1494_f_at
477.8
0.054470
1598_g_at
645.4
0.162935
160020_at
712.8
0.127645
1729_at
68.2
0.872355
1773_at
334.7
0.267463
177_at
272.9
0.117160
179_at
870.4
0.284747
1861_at
28.0
0.849473
Total number of rows: 22283 Table truncated, full table size 561 Kbytes .Supplementary file
Size
Download
File type/resource
GSM9793.CEL.gz
3.1 Mb
(ftp) (http)
CEL