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Sample GSM9799 Query DataSets for GSM9799
Status Public on Aug 06, 2004
Title nl115
Sample type RNA
 
Source name primary acute lymphoblastic leukemia cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:104, Count:32
Corner- Avg:6715, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:31.037680,SFGene:All
Background:Avg:47.87,Stdev:0.85,Max:49.7,Min:45.7
Noise:Avg:1.67,Stdev:0.04,Max:1.8,Min:1.6
RawQ:2.15
Keywords = ALL
Lot batch =
 
Submission date Sep 06, 2003
Last update date May 28, 2005
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL96
Series (6)
GSE635 Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643 ASP sensitive all ALL
GSE650 DNR sensitive all ALL

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 681.8 0.014937
1053_at 263.1 0.081337
117_at 329.6 0.234557
121_at 1187.2 0.006532
1255_g_at 131.2 0.418069
1294_at 797.1 0.000673
1316_at 339.1 0.098054
1320_at 147.7 0.541184
1405_i_at 75.4 0.635055
1431_at 51.2 0.520620
1438_at 345.9 0.218983
1487_at 389.4 0.320830
1494_f_at 265.8 0.127645
1598_g_at 679.1 0.081337
160020_at 641.5 0.107301
1729_at 358.1 0.081337
1773_at 296.6 0.066865
177_at 231.4 0.479380
179_at 1304.6 0.017001
1861_at 458.5 0.001602

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.




Supplementary file Size Download File type/resource
GSM9799.CEL.gz 3.1 Mb (ftp)(http) CEL

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