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Status
Public on Aug 06, 2004
Title
nl143
Sample type
RNA
Source name
primary acute lymphoblastic leukemia cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: Human Total RNA Project: Evans Sample User: jmorris Experiment User: jmorris Algorithm: Statistical Corner+ Avg:49, Count:32 Corner- Avg:4002, Count:32 BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:29.579781,SFGene:All Background:Avg:49.53,Stdev:1.04,Max:52.5,Min:47.7 Noise:Avg:1.90,Stdev:0.35,Max:3.9,Min:1.6 RawQ:2.14 Keywords = ALL
Submission date
Sep 06, 2003
Last update date
May 28, 2005
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL96
Series (5)
GSE635
Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643
ASP sensitive all ALL
GSE647
PRED resistant all ALL
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.
Data table
ID_REF
VALUE
Detection_p_value
1007_s_at
742.1
0.081337
1053_at
270.6
0.073830
117_at
293.7
0.175989
121_at
1402.8
0.002617
1255_g_at
137.1
0.302547
1294_at
541.4
0.027860
1316_at
281.1
0.127645
1320_at
36.6
0.824011
1405_i_at
252.4
0.070073
1431_at
126.6
0.204022
1438_at
433.2
0.008689
1487_at
417.0
0.284747
1494_f_at
480.3
0.011447
1598_g_at
1050.4
0.089405
160020_at
862.4
0.098054
1729_at
277.2
0.138765
1773_at
176.6
0.358690
177_at
254.1
0.189687
179_at
1343.9
0.017001
1861_at
89.0
0.715253
Total number of rows: 22283 Table truncated, full table size 561 Kbytes .Supplementary file
Size
Download
File type/resource
GSM9827.CEL.gz
3.1 Mb
(ftp) (http)
CEL