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Sample GSM9869 Query DataSets for GSM9869
Status Public on Oct 02, 2003
Title mouse_testis_day_01_replicate_1_GPL82
Sample type RNA
 
Source name 1 day old testis
Organism Mus musculus
Extracted molecule total RNA
 
Description Full testis RNA preparation was performed using RNA Stat-60 (Teltest, Friendswood, TX), according to the manufacturer’s protocol. Detection calls were calculated using a Tau value of 0.015. Signal intensities were scaled to an average of 250 (scale factor 3.821).
Keywords = Mus musculus, testis, spermatogenesis
 
Submission date Sep 09, 2003
Last update date Oct 28, 2005
Contact name Nikolaus Schultz
E-mail(s) schultz@cbio.mskcc.org
Phone 646-888-2604
Organization name Memorial Sloan-Kettering Cancer Center
Department Computational Biology Center
Street address 1275 York Ave, Box 460
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platform ID GPL82
Series (1)
GSE640 Spermatogenesis

Data table header descriptions
ID_REF Affymetrix probe id
VALUE signal intensity
ABS_CALL present (P), absent (A), marginal (M) call
DETECTION P-VALUE p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 13.9 A 0.794268
AFFX-MurIL10_at 10.4 A 0.749204
AFFX-MurIL4_at 25.8 A 0.425962
AFFX-MurFAS_at 81.9 P 0.021902
AFFX-BioB-5_at 969.1 P 0.00034
AFFX-BioB-M_at 1827.5 P 0.000044
AFFX-BioB-3_at 1359.9 P 0.000044
AFFX-BioC-5_at 2600.9 P 0.00011
AFFX-BioC-3_at 2182.1 P 0.000044
AFFX-BioDn-5_at 3240.7 P 0.000044
AFFX-BioDn-3_at 11406.6 P 0.000044
AFFX-CreX-5_at 32056.6 P 0.000044
AFFX-CreX-3_at 31459.5 P 0.000044
AFFX-BioB-5_st 115.6 A 0.139482
AFFX-BioB-M_st 201.3 A 0.250796
AFFX-BioB-3_st 246.9 A 0.227636
AFFX-BioC-5_st 29.8 A 0.794268
AFFX-BioC-3_st 53.4 A 0.354453
AFFX-BioDn-5_st 370.5 P 0.023929
AFFX-BioDn-3_st 288.2 P 0.012547

Total number of rows: 12477

Table truncated, full table size 322 Kbytes.




Supplementary file Size Download File type/resource
GSM9869.cel.gz 2.7 Mb (ftp)(http) CEL

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