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Status
Public on Oct 02, 2003
Title
mouse_testis_day_04_replicate_1_GPL82
Sample type
RNA
Source name
4 day old testis
Organism
Mus musculus
Extracted molecule
total RNA
Description
Full testis RNA preparation was performed using RNA Stat-60 (Teltest, Friendswood, TX), according to the manufacturer’s protocol. Detection calls were calculated using a Tau value of 0.015. Signal intensities were scaled to an average of 250 (scale factor 5.182). Keywords = Mus musculus, testis, spermatogenesis
Submission date
Sep 09, 2003
Last update date
Oct 28, 2005
Contact name
Nikolaus Schultz
E-mail(s)
schultz@cbio.mskcc.org
Phone
646-888-2604
Organization name
Memorial Sloan-Kettering Cancer Center
Department
Computational Biology Center
Street address
1275 York Ave, Box 460
City
New York
State/province
NY
ZIP/Postal code
10065
Country
USA
Platform ID
GPL82
Series (1)
Data table header descriptions
ID_REF
Affymetrix probe id
VALUE
signal intensity
ABS_CALL
present (P), absent (A), marginal (M) call
DETECTION P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-MurIL2_at
11.5
A
0.945787
AFFX-MurIL10_at
24.2
A
0.686277
AFFX-MurIL4_at
15.1
A
0.574038
AFFX-MurFAS_at
68.7
A
0.062929
AFFX-BioB-5_at
876.9
P
0.000509
AFFX-BioB-M_at
1692.9
P
0.000044
AFFX-BioB-3_at
964.6
P
0.000044
AFFX-BioC-5_at
2427.3
P
0.00011
AFFX-BioC-3_at
2036.5
P
0.000044
AFFX-BioDn-5_at
2694.5
P
0.000044
AFFX-BioDn-3_at
9210.4
P
0.000044
AFFX-CreX-5_at
25492.2
P
0.000044
AFFX-CreX-3_at
29281
P
0.000044
AFFX-BioB-5_st
62.2
A
0.250796
AFFX-BioB-M_st
80.1
A
0.617401
AFFX-BioB-3_st
133.4
A
0.48511
AFFX-BioC-5_st
13
A
0.910522
AFFX-BioC-3_st
44.1
A
0.58862
AFFX-BioDn-5_st
200.3
A
0.123572
AFFX-BioDn-3_st
230.9
P
0.028457
Total number of rows: 12477 Table truncated, full table size 322 Kbytes .Supplementary file
Size
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