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Sample GSM98833 Query DataSets for GSM98833
Status Public on Apr 03, 2006
Title MGU74Bv2_day1_GFP_rep3
Sample type RNA
 
Source name myoblast (C2C12 cells) differentiated into myotubes
Organism Mus musculus
Characteristics Cell line: C2C12
Growth protocol C2C12 cells were cultured in DMEM containing 10% calf serum. They were then cultured in DMEM containing 2% heat-inactivated bovine calf serum for 3 days to induce differentiation into myotubes.
Extracted molecule total RNA
Label biotin
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Gene expression data from cells on day1 after transduction with GFP.
Data processing The timecourse data from this platform were sample normalized via linear fit to the median scan, using Present genes.
 
Submission date Mar 03, 2006
Last update date Apr 03, 2006
Contact name Vamsi K. Mootha
Organization name Broad Institute
Department Medical and Population Genetics
Lab Mootha
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platform ID GPL82
Series (1)
GSE4330 Mitochondrial biogenesis induced by PGC-1alpha

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M)

Data table
ID_REF VALUE ABS_CALL
104769_at 12.721435 A
104770_at 14.107743 A
104771_at 3.5880969 A
104772_at 26.82918 A
104773_at 3.5065494 A
104774_at 1.6309531 A
104775_at 46.971447 A
104776_at 19.652985 A
104777_at 3.1803586 A
104778_at 17.288103 A
104779_at 23.485723 A
104780_at 17.451197 A
104781_at 1.3863101 A
104782_at 61.405384 P
104783_at 2.364882 A
104784_at 2.0386913 A
104785_at 39.469067 A
104786_at 3.098811 A
104787_at 23.567272 A
104788_at 31.803585 A

Total number of rows: 12477

Table truncated, full table size 267 Kbytes.




Supplementary file Size Download File type/resource
GSM98833.CEL.gz 2.8 Mb (ftp)(http) CEL

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