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Status
Public on Oct 02, 2003
Title
mouse_testis_day_08_replicate_1_GPL82
Sample type
RNA
Source name
8 day old testis
Organism
Mus musculus Extracted molecule
total RNA
Description
Full testis RNA preparation was performed using RNA Stat-60 (Teltest, Friendswood, TX), according to the manufacturer’s protocol. Detection calls were calculated using a Tau value of 0.015. Signal intensities were scaled to an average of 250 (scale factor 1.669).
Submission date
Sep 09, 2003
Last update date
Oct 28, 2005
Contact name
Nikolaus Schultz
E-mail(s)
schultz@cbio.mskcc.org Phone
646-888-2604
Organization name
Memorial Sloan-Kettering Cancer Center
Department
Computational Biology Center
Street address
1275 York Ave, Box 460
City
New York
State/province
NY
ZIP/Postal code
10065
Country
USA
Platform ID
GPL82 Series (1)
Data table header descriptions ID_REF Affymetrix probe id
VALUE signal intensity
ABS_CALL present (P), absent (A), marginal (M) call
DETECTION P-VALUE p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-MurIL2_at
10
A
0.897835
AFFX-MurIL10_at
12.1
A
0.672921
AFFX-MurIL4_at
30.7
A
0.165861
AFFX-MurFAS_at
83.9
P
0.015183
AFFX-BioB-5_at
201.3
P
0.033677
AFFX-BioB-M_at
302.4
P
0.000297
AFFX-BioB-3_at
201.9
P
0.001102
AFFX-BioC-5_at
653.9
P
0.000446
AFFX-BioC-3_at
472.9
P
0.00007
AFFX-BioDn-5_at
760
P
0.000095
AFFX-BioDn-3_at
3081.1
P
0.000147
AFFX-CreX-5_at
7656.9
P
0.000044
AFFX-CreX-3_at
9068.7
P
0.000044
AFFX-BioB-5_st
56.2
A
0.185131
AFFX-BioB-M_st
48
A
0.5
AFFX-BioB-3_st
100.9
A
0.340661
AFFX-BioC-5_st
15.6
A
0.876428
AFFX-BioC-3_st
6.3
A
0.910522
AFFX-BioDn-5_st
201.9
A
0.113665
AFFX-BioDn-3_st
114
A
0.095667
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