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Status
Public on Oct 02, 2003
Title
mouse_testis_day_08_replicate_1_GPL83
Sample type
RNA
Source name
8 day old testis
Organism
Mus musculus Extracted molecule
total RNA
Description
Full testis RNA preparation was performed using RNA Stat-60 (Teltest, Friendswood, TX), according to the manufacturer’s protocol. Detection calls were calculated using a Tau value of 0.015. Signal intensities were scaled to an average of 250 (scale factor 4.814).
Submission date
Sep 09, 2003
Last update date
Oct 28, 2005
Contact name
Nikolaus Schultz
E-mail(s)
schultz@cbio.mskcc.org Phone
646-888-2604
Organization name
Memorial Sloan-Kettering Cancer Center
Department
Computational Biology Center
Street address
1275 York Ave, Box 460
City
New York
State/province
NY
ZIP/Postal code
10065
Country
USA
Platform ID
GPL83 Series (1)
Data table header descriptions ID_REF Affymetrix probe id
VALUE signal intensity
ABS_CALL present (P), absent (A), marginal (M) call
DETECTION P-VALUE p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-MurIL2_at
31.8
A
0.772364
AFFX-MurIL10_at
21.6
A
0.772364
AFFX-MurIL4_at
25.6
A
0.631562
AFFX-MurFAS_at
120.7
M
0.042962
AFFX-BioB-5_at
519.6
P
0.018281
AFFX-BioB-M_at
716.4
P
0.000446
AFFX-BioB-3_at
465.7
P
0.001593
AFFX-BioC-5_at
1372.7
P
0.000195
AFFX-BioC-3_at
871.3
P
0.000052
AFFX-BioDn-5_at
1365.1
P
0.00006
AFFX-BioDn-3_at
7511.9
P
0.000081
AFFX-CreX-5_at
17584.9
P
0.000044
AFFX-CreX-3_at
17295.3
P
0.000044
AFFX-BioB-5_st
103.6
A
0.39692
AFFX-BioB-M_st
41.9
A
0.878399
AFFX-BioB-3_st
80.7
A
0.58862
AFFX-BioC-5_st
34.7
A
0.876428
AFFX-BioC-3_st
19.4
A
0.794268
AFFX-BioDn-5_st
99.1
A
0.287743
AFFX-BioDn-3_st
143
A
0.287743
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