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Sample GSM98856 Query DataSets for GSM98856
Status Public on Apr 03, 2006
Title MGU74Cv2_day1_PGC1a_rep2
Sample type RNA
 
Source name myoblast (C2C12 cells) differentiated into myotubes
Organism Mus musculus
Characteristics Cell line: C2C12
Growth protocol C2C12 cells were cultured in DMEM containing 10% calf serum. They were then cultured in DMEM containing 2% heat-inactivated bovine calf serum for 3 days to induce differentiation into myotubes.
Extracted molecule total RNA
Label biotin
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Gene expression data from cells on day1 after transduction with PGC-1alpha.
Data processing The timecourse data from this platform were sample normalized via linear fit to the median scan, using Present genes.
 
Submission date Mar 03, 2006
Last update date Apr 03, 2006
Contact name Vamsi K. Mootha
Organization name Broad Institute
Department Medical and Population Genetics
Lab Mootha
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platform ID GPL83
Series (1)
GSE4330 Mitochondrial biogenesis induced by PGC-1alpha

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M)

Data table
ID_REF VALUE ABS_CALL
128520_at 405.696 P
128523_at 0.9483803 A
128529_at 39.09434 A
128550_at 10.116056 A
128554_at 7.4816666 A
128577_s_at 4.0042725 A
128578_r_at 55.63831 A
128579_r_at 40.780354 A
128580_at 3.58277 A
128582_at 2.6343896 A
128583_at 22.23425 P
128590_at 29.18904 A
128624_at 1.264507 A
128643_r_at 19.81061 A
128644_at 138.04202 M
128645_at 16.122465 A
128646_at 15.068709 A
128647_at 4.7419014 A
128651_at 13.277325 A
128652_at 2.7397652 A

Total number of rows: 11934

Table truncated, full table size 261 Kbytes.




Supplementary file Size Download File type/resource
GSM98856.CEL.gz 2.7 Mb (ftp)(http) CEL

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