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Sample GSM98862 Query DataSets for GSM98862
Status Public on Apr 03, 2006
Title MGU74Cv2_day2_PGC1a_rep2
Sample type RNA
 
Source name myoblast (C2C12 cells) differentiated into myotubes
Organism Mus musculus
Characteristics Cell line: C2C12
Growth protocol C2C12 cells were cultured in DMEM containing 10% calf serum. They were then cultured in DMEM containing 2% heat-inactivated bovine calf serum for 3 days to induce differentiation into myotubes.
Extracted molecule total RNA
Label biotin
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Gene expression data from cells on day2 after transduction with PGC-1alpha.
Data processing The timecourse data from this platform were sample normalized via linear fit to the median scan, using Present genes.
 
Submission date Mar 03, 2006
Last update date Apr 03, 2006
Contact name Vamsi K. Mootha
Organization name Broad Institute
Department Medical and Population Genetics
Lab Mootha
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platform ID GPL83
Series (1)
GSE4330 Mitochondrial biogenesis induced by PGC-1alpha

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M)

Data table
ID_REF VALUE ABS_CALL
128520_at 336.5244 M
128523_at 13.910123 A
128529_at 36.367428 A
128550_at 14.412898 A
128554_at 15.5860405 A
128577_s_at 27.820246 A
128578_r_at 34.188732 A
128579_r_at 55.137714 A
128580_at 5.195347 A
128582_at 21.786938 A
128583_at 36.70261 P
128590_at 45.75257 A
128624_at 1.8435103 A
128643_r_at 21.786938 A
128644_at 113.79486 P
128645_at 11.228653 A
128646_at 32.512814 A
128647_at 9.552734 A
128651_at 48.43404 A
128652_at 10.558286 A

Total number of rows: 11934

Table truncated, full table size 261 Kbytes.




Supplementary file Size Download File type/resource
GSM98862.CEL.gz 2.8 Mb (ftp)(http) CEL

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