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Sample GSM99006 Query DataSets for GSM99006
Status Public on Aug 31, 2006
Title HCC1171 U133A run at UTSW
Sample type RNA
 
Source name NSCLC cell line
Organism Homo sapiens
Characteristics Test set
Extracted molecule total RNA
Extraction protocol Qiagen RNEasy, following standard protocol for cultured cells
Label biotin
Label protocol Approximately 5 micrograms of total RNA was processed to produce biotinylated cRNA targets using the older (ENZO) Affymetrix protocol
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures, using the Affy GCS3000
Description Baseline (unstimulated) cell line
Data processing RMA
 
Submission date Mar 06, 2006
Last update date Mar 06, 2006
Contact name Christopher D Coldren
E-mail(s) Chris.Coldren@ucdenver.edu
Phone 303 724 6056
Organization name University of Colorado School of Medicine
Department Medicine
Lab Pulmonary Sciences and Critical Care Medicine
Street address 12700 East 17th Place
City Aurora
State/province CO
ZIP/Postal code 80045
Country USA
 
Platform ID GPL96
Series (1)
GSE4342 Gefitinib sensitivity in NSCLC cell lines

Data table header descriptions
ID_REF Affymetrix probeset ID
VALUE RMA-calculated Signal intensity (log2)

Data table
ID_REF VALUE
1007_s_at 11.16065596
1053_at 8.408725553
117_at 6.796076195
121_at 9.52380636
1255_g_at 4.582241209
1294_at 7.75608157
1316_at 6.565287731
1320_at 5.784934256
1405_i_at 4.856671932
1431_at 4.422539618
1438_at 8.115382623
1487_at 8.754291647
1494_f_at 7.268254218
1598_g_at 11.77187336
160020_at 8.363603075
1729_at 9.420148116
177_at 6.33521177
1773_at 6.92568068
179_at 9.719680234
1861_at 7.187228593

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.




Supplementary data files not provided

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