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Sample GSM99008 Query DataSets for GSM99008
Status Public on Aug 31, 2006
Title HCC1359 U133A run at UTSW
Sample type RNA
 
Source name NSCLC cell line
Organism Homo sapiens
Characteristics Test set
Extracted molecule total RNA
Extraction protocol Qiagen RNEasy, following standard protocol for cultured cells
Label biotin
Label protocol Approximately 5 micrograms of total RNA was processed to produce biotinylated cRNA targets using the older (ENZO) Affymetrix protocol
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures, using the Affy GCS3000
Description Baseline (unstimulated) cell line
Data processing RMA
 
Submission date Mar 06, 2006
Last update date Mar 06, 2006
Contact name Christopher D Coldren
E-mail(s) Chris.Coldren@ucdenver.edu
Phone 303 724 6056
Organization name University of Colorado School of Medicine
Department Medicine
Lab Pulmonary Sciences and Critical Care Medicine
Street address 12700 East 17th Place
City Aurora
State/province CO
ZIP/Postal code 80045
Country USA
 
Platform ID GPL96
Series (1)
GSE4342 Gefitinib sensitivity in NSCLC cell lines

Data table header descriptions
ID_REF Affymetrix probeset ID
VALUE RMA-calculated Signal intensity (log2)

Data table
ID_REF VALUE
1007_s_at 9.45320969
1053_at 8.010485217
117_at 6.638125447
121_at 9.205695201
1255_g_at 4.666717177
1294_at 6.959915697
1316_at 6.739626279
1320_at 6.171540135
1405_i_at 4.951618896
1431_at 4.494027819
1438_at 7.619120796
1487_at 8.057896896
1494_f_at 7.418013595
1598_g_at 9.786646616
160020_at 8.857185829
1729_at 8.368695553
177_at 6.741035776
1773_at 6.699508062
179_at 9.664923095
1861_at 6.047097477

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.




Supplementary data files not provided

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