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Sample GSM994857 Query DataSets for GSM994857
Status Public on Nov 01, 2012
Title CD14dimCD16+ monocytes donor3
Sample type RNA
 
Source name Healthy donor3
Organism Homo sapiens
Characteristics cell: primary cells
cell population: CD14dimCD16+ monocytes
Extracted molecule total RNA
Extraction protocol RNA was extracted using Rneasy Microquit (Qiagen).
Label biotin
Label protocol 100 ng of polysomal-bound RNA were employed to synthesize double-stranded cDNA using 2 successive reverse-transcription reactions according to the std affymetrix protocol
 
Hybridization protocol Labelled DNA was hybrized on the Affymetrix Human Gene 1.1 ST processed on an Affymetrix GeneTitan device.
Scan protocol Array scanning was performed according to the manufacturer's instruction (Affymetrix)
Description RMA expression value derived from Genesprings GX 7.3 (Agilent)
Data processing Statistical analysis were performed using GenSpring GX 7.3 (Agilent). Expression data was normalized using the RMA algorithm. Probes with an expression lower than 25 Units were filtered out.
 
Submission date Aug 30, 2012
Last update date Nov 01, 2012
Contact name Maxime Touzot
E-mail(s) mtouzot@hotmail.com
Organization name Institut Curie
Lab U932
Street address 26 rue d'ULM
City PAris
ZIP/Postal code 75005
Country France
 
Platform ID GPL11532
Series (1)
GSE40484 Human inflammatory dendritic cells induce Th17 differentiation

Data table header descriptions
ID_REF
VALUE log(2) RMA

Data table
ID_REF VALUE
7892501 4.034734
7892502 7.949377
7892503 2.954442
7892504 8.21307
7892505 3.781311
7892506 7.698744
7892507 4.162599
7892508 7.962035
7892509 9.929605
7892510 5.826441
7892511 6.118066
7892512 5.474894
7892513 5.77569
7892514 10.19973
7892515 8.670492
7892516 2.745829
7892517 7.019603
7892518 3.323384
7892519 6.72503
7892520 8.885157

Total number of rows: 33297

Table truncated, full table size 549 Kbytes.




Supplementary file Size Download File type/resource
GSM994857_IS09_ARN0018_s1h1_B09_hGene.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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