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Status
Public on Mar 08, 2006
Title
brain, Left frontal Lobe: Extract17_le1
Sample type
RNA
Source name
brain, Left frontal Lobe
Organism
Homo sapiens Characteristics
tissue: brain, Left frontal Lobe
Extracted molecule
total RNA
Extraction protocol
RNA extraction was performed as described previously (Mischel PS, Shai R, Shi T, et al Identification of molecular subtypes of glioblastoma by gene expression profiling. Oncogene, 2003;22:2361-73) and analyzed on both a spectrophotometer and Agilent 2100 Bioanalyzer (Agilent Technologies, Palo Alto, CA).
Label protocol
Probes were prepared using standard Affymetrix protocols and hybridized to Affymetrix HG-U133A and HG-U133B arrays (Affymetrix, Santa Clara, CA).
Hybridization protocol
Standard Affymetrix protocols were used.
Scan protocol
Standard Affymetrix protocols were used.
Description
AO
Submission date
Mar 08, 2006
Last update date
May 22, 2013
Contact name
Winnie Liang
E-mail(s)
wliang@tgen.org Organization name
Translational Genomics
Street address
445 N. Fifth Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85012
Country
USA
Platform ID
GPL96 Series (1)
Data table header descriptions ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS 5 or GCOS software.
ABS_CALL The detection value calculated by the MAS 5 or GCOS software
DETECTION P-VALUE The detection p-value calculated by the MAS 5 or GCOS software
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
1810.2521
P
0.004484
AFFX-BioB-M_at
3224.8848
P
0.000754
AFFX-BioB-3_at
1619.7346
P
0.000509
AFFX-BioC-5_at
4189.6084
P
0.000169
AFFX-BioC-3_at
3781.315
P
0.000127
AFFX-BioDn-5_at
3665.9023
P
0.000110
AFFX-BioDn-3_at
24656.8
P
0.000127
AFFX-CreX-5_at
41014.164
P
0.000044
AFFX-CreX-3_at
61799.08
P
0.000044
AFFX-DapX-5_at
119.91294
A
0.368438
AFFX-DapX-M_at
177.28423
A
0.396920
AFFX-DapX-3_at
36.567837
A
0.891021
AFFX-LysX-5_at
157.19339
A
0.327079
AFFX-LysX-M_at
52.724342
A
0.783476
AFFX-LysX-3_at
94.25398
A
0.603080
AFFX-PheX-5_at
21.647707
A
0.910522
AFFX-PheX-M_at
19.36708
A
0.941556
AFFX-PheX-3_at
127.90264
A
0.425962
AFFX-ThrX-5_at
25.260422
A
0.834139
AFFX-ThrX-M_at
29.845957
A
0.712257
22283 687 Kbytes .Supplementary file Size Download File type/resource GSM99522.CEL.gz
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