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Status
Public on Mar 08, 2006
Title
brain, Left frontal Lobe: Extract17_le2
Sample type
RNA
Source name
brain, Left frontal Lobe
Organism
Homo sapiens Characteristics
tissue: brain, Left frontal Lobe
Extracted molecule
total RNA
Extraction protocol
RNA extraction was performed as described previously (Mischel PS, Shai R, Shi T, et al Identification of molecular subtypes of glioblastoma by gene expression profiling. Oncogene, 2003;22:2361-73) and analyzed on both a spectrophotometer and Agilent 2100 Bioanalyzer (Agilent Technologies, Palo Alto, CA).
Label protocol
Probes were prepared using standard Affymetrix protocols and hybridized to Affymetrix HG-U133A and HG-U133B arrays (Affymetrix, Santa Clara, CA).
Hybridization protocol
Standard Affymetrix protocols were used.
Scan protocol
Standard Affymetrix protocols were used.
Description
AO
Submission date
Mar 08, 2006
Last update date
May 22, 2013
Contact name
Winnie Liang
E-mail(s)
wliang@tgen.org Organization name
Translational Genomics
Street address
445 N. Fifth Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85012
Country
USA
Platform ID
GPL97 Series (1)
Data table header descriptions ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS 5 or GCOS software.
ABS_CALL The detection value calculated by the MAS 5 or GCOS software
DETECTION P-VALUE The detection p-value calculated by the MAS 5 or GCOS software
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
3796.7026
P
0.001593
AFFX-BioB-M_at
8718.023
P
0.000127
AFFX-BioB-3_at
3605.334
P
0.001102
AFFX-BioC-5_at
8787.668
P
0.000044
AFFX-BioC-3_at
8477.535
P
0.000070
AFFX-BioDn-5_at
7085.0967
P
0.000110
AFFX-BioDn-3_at
49922.035
P
0.000110
AFFX-CreX-5_at
103770.375
P
0.000044
AFFX-CreX-3_at
153121.6
P
0.000044
AFFX-DapX-5_at
221.74599
A
0.354453
AFFX-DapX-M_at
423.32443
A
0.287743
AFFX-DapX-3_at
75.50739
A
0.957038
AFFX-LysX-5_at
21.771618
A
0.659339
AFFX-LysX-M_at
144.86404
A
0.686277
AFFX-LysX-3_at
34.523964
A
0.574038
AFFX-PheX-5_at
34.34453
A
0.963431
AFFX-PheX-M_at
20.471966
A
0.966323
AFFX-PheX-3_at
214.32094
A
0.672921
AFFX-ThrX-5_at
63.54143
A
0.852061
AFFX-ThrX-M_at
81.73226
A
0.772364
22645 686 Kbytes .Supplementary file Size Download File type/resource GSM99523.CEL.gz
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(ftp) (http) CEL
