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Sample GSM99650 Query DataSets for GSM99650
Status Public on Mar 05, 2007
Title Gastrocnemius 0.5 mg/kg cerivastatin-treated no exercise replicate 2
Sample type RNA
 
Source name gastrocnemius muscle
Organism Rattus norvegicus
Characteristics Female Sprague-Dawley strain Crl:CD(SD)IGS BR, 10 weeks of age
Treatment protocol 0.5 mg/kg/day Cerivastatin -treated for 14 days
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
Label biotin
Label protocol Approximately 4 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Gene expression data from rat gastrocnemius muscle
Data processing Affymetrix Microarray Suite version 5.1 (MAS5.1)
 
Submission date Mar 08, 2006
Last update date Mar 08, 2006
Contact name Jennifer L Seachrist
Organization name Pfizer Inc
Department Safety Sciences
Street address 2800 Plymouth Road
City Ann Arbor
State/province MI
ZIP/Postal code 48105
Country USA
 
Platform ID GPL1355
Series (1)
GSE4418 Expression data from cerivastatin-treated rat skeletal muscle

Data table header descriptions
ID_REF Affymetrix probe set IDs
VALUE MAS5.1-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)

Data table
ID_REF VALUE ABS_CALL
1367452_at 6965.8 P
1367453_at 6902 P
1367454_at 2480.8 P
1367455_at 11086 P
1367456_at 12200.9 P
1367457_at 2587.5 P
1367458_at 840 P
1367459_at 11987.4 P
1367460_at 7572.6 P
1367461_at 1291.3 P
1367462_at 6335.1 P
1367463_at 5945.8 P
1367464_at 2546.4 P
1367465_at 2579.8 P
1367466_at 2941.6 P
1367467_at 9038.9 P
1367468_at 1504.3 P
1367469_at 18152.8 P
1367470_at 3286.2 P
1367471_at 2395.9 P

Total number of rows: 31099

Table truncated, full table size 565 Kbytes.




Supplementary data files not provided

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