Gm3404 predicted gene 3404 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Gm3404provided by MGI
Official Full Name: predicted gene 3404provided by MGI
Primary source: MGI:MGI:3781582
See related: Ensembl:ENSMUSG00000079091 AllianceGenome:MGI:3781582
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression: Restricted expression toward testis adult (RPKM 63.7) See more
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Genomic context

Location:: 5 G3; 5 85.23 cM

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	5	NC_000071.7 (146462580..146465363)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	5	NC_000071.6 (146525783..146528553)

Chromosome 5 - NC_000071.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: uncharacterized protein LOC100041554

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001243109.1 → NP_001230038.1 uncharacterized protein LOC100041554

See identical proteins and their annotated locations for NP_001230038.1

Status: VALIDATED

Source sequence(s)

AC093356

Consensus CDS

CCDS57404.1

UniProtKB/TrEMBL

L7N249, Q9D506

Related

ENSMUSP00000106226.2, ENSMUST00000110596.2

Conserved Domains (1) summary

cd06224
Location:89 → 177

REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

NC_000071.7 Reference GRCm39 C57BL/6J

Range

146462580..146465363

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_011240997.3 → XP_011239299.1 uncharacterized protein LOC100041554 isoform X1

UniProtKB/TrEMBL

L7N249

Conserved Domains (1) summary

cd06224
Location:89 → 177

REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...