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    5730460C07Rik RIKEN cDNA 5730460C07 gene [ Mus musculus (house mouse) ]

    Gene ID: 70594, updated on 8-Feb-2024

    Summary

    Official Symbol
    5730460C07Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 5730460C07 geneprovided by MGI
    Primary source
    MGI:MGI:1917844
    See related
    Ensembl:ENSMUSG00000062046 AllianceGenome:MGI:1917844
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in placenta adult (RPKM 1.2), liver E14 (RPKM 0.6) and 2 other tissues See more
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    Genomic context

    See 5730460C07Rik in Genome Data Viewer
    Location:
    3 H3; 3 78.62 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (153494942..153497724, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (153789305..153792087, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 Neighboring gene ubiquitin-conjugating enzyme E2 L3 pseudogene Neighboring gene predicted gene, 22206 Neighboring gene predicted gene, 25757 Neighboring gene ankyrin repeat and SOCS box-containing 17, opposite strand Neighboring gene ankyrin repeat and SOCS box-containing 17

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_045801.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK017676
      Related
      ENSMUST00000081193.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      153494942..153497724 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)